NONHSAT097291
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT097291 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1945 nt |
Genomic location |
chr4-:87846046..87856002 |
Exon number |
3 |
Exons |
87846046..87847478,87854547..87854694,87855639..87856002 |
Genome context |
|
Sequence |
000001 CCGGGATTGG TGGGAGGATC GTGGGGGAGC GGCAGCTCAG GACGGAATAC GGCAATGACC GCCCCGGTCG CGAGGGTGAC 000080
000081 CCTGCCCCGG GCTGCTGTGG GGGCGCAAGA ACCCTTTCAC TTTACGGCGA GATTAAGCTC AGGGTCAAGT TCTGAGCAAA 000160 000161 AAGTGTCAAG GAGCCTTTTT GCAACCTCCT ATAATATTGA AACAGATTCT GTGCCCTTTA AAGGAGATAA TAACTAACAT 000240 000241 CTGGGGAGCG CTTTACAATT TAGAAAAGGC CTTTCACACA CAGGCCTGTT TCATCTTCAC AACAATCTTA TAAAACAGAT 000320 000321 ATATTGTTCC CATTTCCCAA ATAATGAAAC GGAAGCGCCG AAAATATCTC CTATAGGGCT CTTCAAACTG TGGTCAACTT 000400 000401 AGTAAATGAT GTTGACAGTG GAAGTGTGAT CATTTTATTT TCCTGCCTTT GGAATTGAAG ATTGTAATTT TGCAAAAATT 000480 000481 TTGTTGAAGA TGATGTAGCT TTGGTTCAGA GAGTTCCAAG TCTCTTCTTC GGCCTCTCAA ACATGGTACC ATCCCTAATG 000560 000561 AAGTCAACGG GTCCAGCATG ACAGGATGGA AGTACAAGTG TCAGCACCTA TGTGAGTCCC AAGAGGGGAA ATTAGAAACA 000640 000641 AAAAGGAAGA AGAGGACATA GGCCAGGCAC GGCGGCTCAC GCCTGTAATC CCAACACTTT GGGAGGCCAA GGTGGGCAGA 000720 000721 TCACCTGAGG TCAGGAGTTC AAGACCAGCC TGGTCAACAT GGCAAAAGCC CATCTCTACT AAAAAATACA AAAAATTAGC 000800 000801 CAGGCGTGGT GGTGGGAGCC TGTAATCCCA CCTACTCGGG AGGCTGAGGC AGGAGAATTG CTTCAATCTG GGAGGCAGAG 000880 000881 GTTGCAGTGA GCTGAGATCG TGCCATTGCA CTCCAGCCTG GGCGACAGAG TAAGACTCTG TCTCAGAAAA AAAAAAAAAA 000960 000961 AAAGGAAAAA AAAAGATGAT ATAGTCAAAG AAATAACATT AAATTTCTTA TAATTTAAGA TGAATGATTT CAGATTGAAA 001040 001041 AGTTTATAAA GGTGCCAAAG AGAAAAGGAA AGATCCACAC TAGATACATT AGAATGAAAT GTCAAAGTAA CATACATAAA 001120 001121 GAAGAAATTC TGAAATCTTC TAGAAAGAAA GAACATGTTA TCTATGAAGG AACAAGGATC ATATTGATAT TAGATTTCTC 001200 001201 AACAGCACAT GTGCTGCAAG AAGACAAAGG AGTAATATTA AGTATTGTGA AACAAACCTA GAGCTTAGAA TTTCATATTT 001280 001281 AAAATTCTAA ATAAATTATC ATTCAAATTG TTATAGTTTG GGGGCCAGGT GTGGTGGCTC ATGCCTATAA TCCCAGCACT 001360 001361 TTGGGAGACT AAGGCGGGCA GATCACTTGA GCTCAGGAGT TTGAGACGAG CCTGGCAAAC ACGGCAAAAC CCCATCTCAA 001440 001441 AATACAAAAA TTAGCTAGAT GTGGTGGTGC ATGCCCATAA TCCTAGCTAC TTGGGAGGCT GAGGCACGAG AATTGCTTGA 001520 001521 ACTTGGGAGG CGGAGGTTGC AGTGAGCCAA GATCGTGCCA TTGCACTCCA GCCTGGGCGA CAGAGTGAGA CTCGGTCTCA 001600 001601 TATATATATG AGACTGACAA ATTGATACAG TTTGGATATA TGTCCCTGCC CCAGTCTCAT GTTGAACTGT AATCTGCAAT 001680 001681 GTTGGAGGTG GGGCCTGGTG GGAGGTGGTT GGATCATGGG GGCAGATTTC CATGAATGGT TTAACACCAT CTTCCTGGTT 001760 001761 TGTCCTCATG ACAGTGAGTG AGTTCTTGAG AGAACTCATC ATTTAAAAAT GTGTGGCACT TCCTCTCTTT CTCTCTTGCT 001840 001841 CCTGCTCTGG GTATGTGACG TGCCTGCTCC CCCTTTGCCT ACTGCCATAA TTCAGAGTTT CCTGAGGCCT CCCAAGAAGA 001920 001921 TAAGCCGATG CCAGCACCAT GCTTC |
Predicted Small Protein
Name | NONHSAT097291_smProtein_1658:1780 |
Length | 41 |
Molecular weight | 4684.3395 |
Aromaticity | 0.175 |
Instability index | 42.51 |
Isoelectric point | 4.91058349609 |
Runs | 7 |
Runs residual | 0.00302419354839 |
Runs probability | 0.042672925026 |
Amino acid sequence | MLNCNLQCWRWGLVGGGWIMGADFHEWFNTIFLVCPHDSE |
Secondary structure | LLLLLLLLLLLLLLLLLEEELLLHHHHHLEEEEEELLLLL |
PRMN | - |
PiMo | - |