NONHSAT097375
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT097375 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2474 nt |
Genomic location |
chr4+:89644073..89651065 |
Exon number |
2 |
Exons |
89644073..89644466,89648986..89651065 |
Genome context |
|
Sequence |
000001 GTCAGAACTG AGTTCTTGCT GAGGTTTGCA TTGGGCCCTG TCTCCGGGCA GCTGCAGCAT AACACGGAGT CACCCTTGCT 000080
000081 GTCTAAGCCT TGTGGCTGGA GGGGAAGAGT GAGGACCAAG CTGTCAACAA TCCCAGACCT GCCAAGCCCC ATTTGTCTGT 000160 000161 GTGCCTGCCA GGATTCTAAG ACTGCATTTG GGAATTTTGA CTTTTACTGA ATGTGAAATT CTGTGTATAT ATAGCCTTGG 000240 000241 TGAGCTGACC CAGTCAGGGA TGACTCTGAT GTACTTTTGT CTTACAGGAT TCAGAATCCA TGGCTGGAAG AGGTAGTAAG 000320 000321 GCCATTGGGA GGGCATGCCT CTCCTCAGCC CACCCCCACC CTGTGTGGGT CTCCATTCTG AAATTTCCAT TCAGATGACC 000400 000401 CGGTCCTAGG CAGGGACCAA AATTCCTTGT CAGCTGAGGA AGTCCTGAAG AAACATCCTG AAGATGATGA CTGCACTGCC 000480 000481 ATCGTGGGCA GATGCAGCTT CCATCTACCT GAGGGCTGAA GGGGAAAACC TTTCACACAC GTGAGGAAGG CGCAGCTCTG 000560 000561 TGGAAAGGTC ACTAGAATGG CAGCGGCAGC AAATAGGGCT CCAATGCACG TTTGCAGTTA ACTGGGTCCA AGGAGAGCAT 000640 000641 GGCCCTCCAC AGCAAGTTTG CTCTATAGAA TAAAGTCCTG AGCTTGTTTT TATCACAGTT AGACAGAGAA TGGTCTCTTG 000720 000721 TTTCTCAGTT ATCCAGGGAA GAACAGTGTA TATTCTCTGT AGATGAGTGT TGTCTAATGT AGTGATTAAT CTCTGCTAGT 000800 000801 GTTAGGAAAG CTCCACTACt gtgtgtgtgt gtgcgtgcat gcgcgtgcgc atgtgCACAT ACTGCAGTCT TGACTTTCCA 000880 000881 ATTACAAAAT GCCTAAGTCA GGTCACATTG TCTTCTTCCA GCCAGTTTCT AAGGCAGGCA ATGGAAACAG GAGCCGATGC 000960 000961 CAAATGGTCT AGAGGCAGAA GGGCTGCATG CTTTGCAGGG CCAGCCCCAA GGCTGCCTTC CAGAGCTGCA CTTTCTCTGG 001040 001041 GGACAGTAAA CTCTCACCGC AGCTGCCAGC CCCCTGTGCT TGGCCATGCC CCTCACATGG ACTTGGAATC AGTGTCTCTC 001120 001121 TTGCTGATGA GCACCTCCAG GAGCCTCAGT TTCGCCTTTA TGTGCTTATA TTCACTGTAT TCTTCAGCCA TAGGAGTGCG 001200 001201 GTCTTCCTTC TGGACATTTC TAATGCAAAT AAAGGAAAAA GGGGTCTGAG GATCATTTTC TGTCTTTGCT AGATACTATT 001280 001281 CATCGGGCAA ATTATCATTG TTTAGAAACT TTGCAGTTTA TCAACTTGTA GAATCAGTGT TGCCGAGTGG CCCTTGGTCT 001360 001361 CAAGACTGGG GCTGGATTTA GACAAGTAAT GAAAATGTTT CACCCAGAAG GCAACATGCA ACTGAGTTTT TATATAGTTA 001440 001441 ATCTGGCATC CTGTATGATA AGAAGGCTAA GAAATGCAGA AATTCTCTCT GCTAAGTATG AATTCACATT GAGCTCTCAT 001520 001521 ACACCAAAAT CTTTTATTCA TACTTAATGT TTTCTCATTC TTATATATTT CATCTCGTGA AATTTTAAAT TTTTAATTAG 001600 001601 CAACTGGTCC ACAACTTAGt tttttttttt tttttttttt CCAAAAACAG ATAGTTAATA CTCCTACTTA TCATAAAACT 001680 001681 GTGTTAGAAT TCAGCAGCTG GATTACATAA TACTATTATA ATAAGCCTTT ATTATTGAGT AACTTTACAT ACATAATATT 001760 001761 TATATGCACA AGTATttgag agcttatagg tcaagccctg tgctaagtac tttgtaccca tgatctgata gaacccttat 001840 001841 aacaccttga tgagatgcag ccattttcta cacactacac atgatgaaac cagcacagga aatcagataa cttgccTGCT 001920 001921 CTTGGCCACC ACGCGGTGCG CTGCTGCTTT GTGTTTTATG GGAAATTGCA CATGGCAAAC ATTCAACCAT AGGCTTCCTG 002000 002001 CCTTTATTAT TAAAGGGCAA ATATGGGTAA GGAGGATAGC ATGGGGCTTG ATTTGTTCAA TGACCTAAAA ATAAACTGAT 002080 002081 CTTATTCATA CCCTGCCTTG TTCTAGGAAA GGATTCTAGT GGCTTCTCAG CAGAGGGCAG GGCAAGGAAC AGGTGCTCAG 002160 002161 GAATTGGAGC ATCTGGCACG CAGGCCCCCA CTGCACTCTG AGGGGCTTCA CTCTCCTCAG ACACGAAGTC ATGGAACCAG 002240 002241 AGCTTATCTC CTAAGTCCCT CATAGTTCTA AACTTTTTTG ACAATTAAGT TAACGTCCTC CATTGACATT TTCTTAAAAC 002320 002321 CTGGGTGGTT TGCGTAATTC TACATGTATA AGATATCTGT GCATAATGTG ACTTAGAATA ATATAAAAAA GGATAAGCCA 002400 002401 AAAAATAGGC TTAGATGAAA GACTGGAAAG ATACACGTCA AAACATTAAT TCTGACTTGT CTTTGGTTAT TATT |
Predicted Small Protein
Name | NONHSAT097375_smProtein_1388:1546 |
Length | 53 |
Molecular weight | 6091.095 |
Aromaticity | 0.115384615385 |
Instability index | 59.1848076923 |
Isoelectric point | 9.51312255859 |
Runs | 8 |
Runs residual | 0.00347674923946 |
Runs probability | 0.0324037272567 |
Amino acid sequence | MKMFHPEGNMQLSFYIVNLASCMIRRLRNAEILSAKYEFTLSSHTPKSFIHT |
Secondary structure | LLLLLLLLLLEEEEHHHHHHHHHHHHHHHHHHHHLLEEEEELLLLLLLLEEL |
PRMN | - |
PiMo | - |