NONHSAT097518

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT097518

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

4844 nt

Genomic location

chr4+:100010008..100222513

Exon number

10

Exons

100010008..100010435,100054706..100054956,100075702..100078736,100125514..100125588,100207952..100208190,100209823..100209942,100212094..100212105,100221456..100221527,100221626..100221812,100222108..100222513

Genome context

Sequence
000001 GGCTGCTAAG TTGTGCGTTC CAGGGTGCAC TCGCCGGCGA GGCTGCACGG CGCCGGTTTC ATTGCTAAAA TCCGACGGAC 000080
000081 TTGTTGCAGA ACTCGTTTTT TTTGTCGGGA AAGGGCTTCC CCGTGTAACT TTACAGCAGT TATCGTAGAT AAGACTTGCA 000160
000161 AATTACAGAT GTGGACGGTG AGGGAACGGG AATTTCACTG AAAGCGCCTG AGAACCAGTA AGAGACCTGC AACAGCTTTG 000240
000241 TGCTCCACTG GCGAATGCTT CCTCCCCTAA TACACATTAT GTGTGCTTGG AGACACAAGG AGTAAGATAC AGCCCCTCAA 000320
000321 GGGACTCGTC ATAGGGAGAG GACACAGCTT TGGGAATAAA GGGGCCACAA AGGAGGAGAG AGGAGTTTGC TGAAACTTCC 000400
000401 CAAGCTCCCA TTCCAGCAGT TCCTGAAGGA TTCATTTCTC TCTGAGGATC TCATGAGGTG GCTTAGCAGC TAGAATCTCT 000480
000481 TCCTTAACAG TGGGAAGAAC AACTCCTGGA AATTTAGGTC GGCTTTGACT GGATTTAAAA GAAAGCTGTA TAATTCCACT 000560
000561 TCTGTATATA CAACCAAAGG AAATGAGATG TGCATACCCA TGTTCAATGA AGCATTATTC ACAATAGCCA AAATGTGGAA 000640
000641 CCAATCCTTA AACAAAAGGA AAACAGAAAA TCTGCTCAAG TCCCTGCAGG CACCTGAGAA AATCACAACC CACACTTGCG 000720
000721 AACCCCTAGG AGACCTAAAG CTGTGGTTTT ACAAATAAAC AGATAAGTAA CATTCCTACT CTTTCCTATA GGTACTCAAT 000800
000801 CTTCTTAACA ACTCCCATCC CACACAGGTT TGCATCCCCA GCAGATACAT ATGGCTATGT GGTCACCCAT TCGATCAGCC 000880
000881 TATAAAAGAC TTGTCTTATT TGATATTGTG AAACCCATGG TTATCAGTGT ATATGAAAAT GTTTGGTTCA GGGGTCAATG 000960
000961 TACAATATGA CAAGCAAAGT CCTCTAATAC ACAGTTATAT AAAATCACTC ACCTGAGAGC TAAGTGGACA ATTGGCCTTA 001040
001041 TATTGGCTGG AGTTGGAGCC CCAGAGGGAA AATTTGCCTA TTATTAGGCA ACTCTTCAAA ACTTTACTTA TTCGTTTCTA 001120
001121 AACACTGTCT CATAAAATGG GGGATGCTTT AGATGAATTA AGATTAGCAC TAGATTACTT ATTCGTTGAA AATTAGCACT 001200
001201 AGATTTCTTA TTGGTTGAAC AAGGAGGAGT GTGCACCATA ATCAATATAA CCTGCTGCAG TTATGTAAAC ACCTCAGGTC 001280
001281 ACATAGAAGA AGATATACAG AAAATACATG AACAAGCTGT GTGGTTGCGT AAATATAACC AAGGCACCAA TCCCAACTGT 001360
001361 ATCTGGTCAG CCATTAGAAG CACCCTCCTG AGTCTCACTT GGTTGTTGCC CTTCCTAGGA ACTTTGATAG TTGTCTTATT 001440
001441 ATTAATCTTT GGCCCTTGCT TGTTTAAATT CTTGGTAAAG TTTGTGTTTT TTAGATTACA ACAATTCCAC ATAAAGATGA 001520
001521 TACTGACACA AAGCTTCCAA TCCATCCCGT CTTCTGAACC GGGAAATAAA GACACCCTGC CTTTAGGTGT CTTTAGATCT 001600
001601 AGATCAGGCA TCTAGAGATT TTTACTCCTC CAATACTTGG CAGGGTCTAT GCCCGTAGAC TCATCAGGAT ACCATGTAAA 001680
001681 TGAGGACCTC CCTTGGTACC CCAGAGGCCA ATTGTAGACC CTTATGAGAA AATCCTGTCC CCAAAATGAA CATCCACTGT 001760
001761 CAGCAGGAAG AAGTTACAGA AGACCAGCCT TTGCCCTTAC GATTAAGGGT CCTCTTGTAA GTAGAGAGGG GAATGTTAGG 001840
001841 AAAGCAGGAG CCTAGGTGAT CCAGAATGAC ACCATTTTAA AATAAACTCC ACCTGAAAAC TAGCAAGGCA TCTGCACACA 001920
001921 TCTGTTTAGC AAGTATATCC TTCTGTAACT GGAATAAAAA GCGTTATTTT AGAATATGCC TATAGTTTGT AATAATTAGC 002000
002001 CGAGGGAAAA AAAGTTCACA TTGGTGTAGG AAAAGTGCCC TAATGGTCAT GGGTAATAAT GGGACCGTGG TTCTGGTCAG 002080
002081 TGATTTGATG GAAGGGGTGT AGATAATATA TTGTTGTAAA TAATAAAAAT AAAAAATTGT TGTAAGTAAT AAATAAAATA 002160
002161 ATATTGTTGT AAGTAATAAA GTAGGAGAAA TATTTGGTCT TTTGCTTTTG GGTTAGTGCA ACAGTAGTAC CATTACTTGG 002240
002241 AGGAGAAGTT AGAGAAGGAC AAGAATAGGC TTGAATAAGA TGAGTGAGAA GAGAGAAAAA TTCCGTAAGT GGAGATGGCC 002320
002321 AGGGAACACC AGGGCAGCAG AATCTAACTC TGAATTTAAT GCTGTTGTCT GTTCATATTG CACTGCGCTG TAATCTCCCT 002400
002401 ATCTTTCCTA AACCATTGGC AAAGTCTGCT ATCCACAGGG GCCTTGGGTC GGTGGTGCTT TGGGAAATAC CAGAAGAGGG 002480
002481 AAAGTACGGC AAATGTGCAG TGTCACAGAT GATAGGAGGA AAGCTGGCCA GTGGGATGAT TAAAACAATT TCGGTGGGAG 002560
002561 TGGGAATTCA GACCATGTAA ATGGTCTGAA TTAAGAAAAT TTCAAGAAAC AAAAAATGTT TCTAATGAGC CAAAGTGAAA 002640
002641 GCTCTTCATG ATTTCTTTAT AGAGGCTCTC TAGTGCTTGT CCTAATTTCC TGAAATCTCA TGGGTATCTT ACTCTCCTGG 002720
002721 TGCCCGCCTC AAACATTCAC TGTAGCAATT ATATGAGCAG CCTGGAGAAT CCCAATCCCA GTGGCCTTGC TCCCTGGATC 002800
002801 TACTTTCTCT TAAAAATCAT TCCCCTAAGT TTCCGTCACT TGGTTGAAGT TTAGTAGATA TCTCCACATC TCCAGCTAGA 002880
002881 ACAGCACCGG AATTTCAGGA CTAGGGCAAT AGAGTCTGAT ATTAAATTCT ATTTCTATCT ATCTATCTAT CTATCTATCA 002960
002961 TCTATCTATC TATCTATCTA TCTATCTATC TATCTATCCA CAGAACAATT TGTGGGATAG TAGCTTTGGG GTCCCAGATC 003040
003041 TAGGATGGGC CTGGTCCTCC ATGCTGGTTC TCCTGGGTGA TATTTCTGTT AGTTTGAACA GTAATCACAC TTTTATTACT 003120
003121 GTTTCATCTT TTTTTTTTTC ACTCTTAGAC TGATTTTATC ATGTGTATAA AACATACACA CACCTACATC TCAAGGATAA 003200
003201 ACATTAATCC TTGAAAAATA TGTGGTCTAA AACTATATTG AGGAGAGAAA GATAGGACAC TTTAATTGCC ACATGATTAA 003280
003281 CACGAGGTCA CCACACAGCT TTCACAAATC TACAAGTCAT TCTATTTAGG CTGAGTCAAG TTCTCCCTTG GGCCAGCCAG 003360
003361 AGCACAAATA ATGGAGCAAT GTGACTCTTC AATGACAGAT CTCTGATTTC CAGAAAAGAG ACTTTGAAAT ACCCAATTCT 003440
003441 AGTAAATATG CAATTAAATT TCCAGCTAAA TGACCTTTGC TCCTGTAGTC TTCATCTTGG GGAAGGGAAA GAAGTCTTAT 003520
003521 TCTGTTTAAT AGTTTGATTT TTATAATAGG GTTTGTCTCT GTTATAAATC TTGTTTGATA TTTAAAATGT TAGCTAAGAG 003600
003601 AAAACTTCTG TTTGTTTTTA TTTAGTGGGA AGAAACTAAC CCTCATTGAG TGCCTAGTTA ACATCAGGCA CTTTGTACAC 003680
003681 ATAATCAATT GAATCTTGAC CACAACCCTG TGAGGTGAAA AATGAGAAGA TTAAATAAGC CATGGGAAGA TTTTTTAAAA 003760
003761 TGACATGAAA CTCCAAGGGT AAAAAGTAGG CTGGGAAATC TTAGGATGGT GAACCATCAT GTTTCCTGAA TGTGAATCCT 003840
003841 GTACCTGGTT TGACTGTAGT CACCCCTTCT CCAACACTCT CCACGATGCC GGCTGCCTCA TGGCCTAAAA TCACAGGAAG 003920
003921 TGGGGTCACC ATGGTACCAC TAACCACGTG GTCATCTGTG CCACAGATTC CTACAGCCAC CATCTACAGA GTGAAGAGAA 004000
004001 GATGTTTATA AAAGATTGTG AGTCTCAGGA TGTTCAACAT GATCAATGCC AAATAAATAT CAGAATACTT GGAAGTAAAG 004080
004081 TACTAATAGT AGGAGTTCCT GATTATCAGG TGCCTATGAT GTGACAGGCA CATTGTGGCC TGTGCTCGAC CAGGAGACTG 004160
004161 CTTTTCCAGG CTGAGATCAA AGACGGTGAT GTGCCTACCC GCAGATCCTA GATGGCCATG TTTGCAACAG AGGTAATGAT 004240
004241 GAGCAGTGCG AAGATGTGAC TCCAAAGCCT GGAGAAGGAC AGACCAGCAT CCCTGCAAGA GATCCAACTG TCTTCTTTTC 004320
004321 CGCAGAGGTC CATAATTTAC ATGGGCCTGA CAAAGAATAC TGTAACTTGC AGAAATTATC TTCAGTTCAA ATCCTTCATT 004400
004401 TTGGGGGTTA AATAACTTGC CCAAGATGTC GAGGGAGCGG AAATACTTGC TGGTCTTGCA GCGGCTGTGG AGCCTGGAAT 004480
004481 CCTGCCAAGA AGAGCATGTG TGAGAGATCA AAATGTTTGC TTACATTCCT CCTGTGAAGG GAGTTGGGAA ATAACCTAAG 004560
004561 AAGCCCAATC CAAAAACAAA GATGTACCAT CCAGTCTTCT CTGTGAGAAC CAAACTACAA ACCATCTGAA TGTTCCAAAA 004640
004641 GTGTTTTGAT GATGTATTGA TGTATTTTAA ATTATCCTGA AAATGTTCTT GGCAGATGCT TAAACATGTA ATTACTGAGA 004720
004721 TGATGTAGAA ATACCAAGTG TTTATTAAAA CAATACAGAG TAATACAAAT GGTATGTTTG TCGCAATATA AAAGTATCTA 004800
004801 AAAATTAAAG AGTTCTTTAA TGGTGAAAAA AAAAAAAAAA AAAA
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Predicted Small Protein

Name NONHSAT097518_smProtein_587:757
Length 57
Molecular weight 6615.7851
Aromaticity 0.107142857143
Instability index 54.4180357143
Isoelectric point 9.09942626953
Runs 7
Runs residual 0.0282982045277
Runs probability 0.0158477805537
Amino acid sequence MCIPMFNEALFTIAKMWNQSLNKRKTENLLKSLQAPEKITTHTCEPLGDLKLWFYK
Secondary structure LLLLHHHHHHHHHHHHHHHHHLHHHHHHHHHHLLLLLLLLLLLLLLLLLLLEEEEL
PRMN -
PiMo -