NONHSAT097559
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT097559 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
2253 nt |
Genomic location |
chr4-:101316498..101318733 |
Exon number |
1 |
Exons |
101316498..101318733 |
Genome context |
|
Sequence |
000001 ATTCATTAAG ATAATAGGAT CATGATTTTT CATTAACTCA TTTGATTGAT ATTATCTCCA TGCATTTTTT ATTTCTTTTA 000080
000081 GAAATGTAAT TATTTGCTCT AGCAATCATT GCTAACCTCT AGTTTGTAGA AAATCAACAC TTTATAAATA CATAATTATG 000160 000161 ATATTATTTT TCATTGTATC ACTGTTCTAA AAATACCATA TGATTATAGC TGCCACTCCA TCAGGAGCAA ATTCTTCTGT 000240 000241 TAAAAGCTAA CTGATCAACC TTGACCACTT TTTTGACATG TGAGATCAAA GTGTCAAGTT GGCTGAGGTT TTTTGGAAAG 000320 000321 CTTTAGAACT AATAAGCTGC TGGTGGCAGC TTTGTAACGT ATGATTATCT AAGCTGATTT TGATGCTAAA TTATCTTAGT 000400 000401 GATCTAAGGG GCAGTTTAGT GAAGATGGAA TCTTGTATTT AAAATAGCCT TTTAAAATTT GTTTTGTGGT GATGATTTTG 000480 000481 ACAACTTCCA TCTTTAGGAG TTATATAATC ACCTTGATTT TAGTTTCCTG ATGTTTGGAC TATTTATAAT CAAGGACACC 000560 000561 AAGCAAGCAT AAGCATATCT ATATTTCTGA CTGGTGTCTC TTTGAGAAGG ATGGGAAGTA GAAAAAAAAA AAAGAAAGAA 000640 000641 AGGAAAGGAA GAGAGGAGAG AAGAAGGCAG GGATCTCCAC TATGTATGTT TTCACTTTAG AACTGTTGAG CCCATGCTTA 000720 000721 ATTTTAATCT AGAAGTCTTT AAATGGTGAG ACAGTGACTG GAGCATGCCA ATCAGAGAGC ATTTGTCTTC AGAAAAAAAA 000800 000801 AAAATCTGAG TTTGAGACTA GCCTGGCCAA CATGTTGAAA CCCCATATCT ACTAAAAATA CAAAAATTAG CCTGGTGTGG 000880 000881 TGGCGCACGC CTGTAGTCCC AGCTACTCTG GAGCCTGAGG AACGTGAATC GCTTGAACCC AGAAGACAGA GGTTGCAGTG 000960 000961 AGCTGAGATG GCACTATTGC ACTCCAGCCT GGGTGACACA GCAAGACTCT GTCTCAAAAA AAAAAAAAAA AAAAAAGGAA 001040 001041 AAAAAAGAAA GAAAGAAAGT CCCAGCACAC CTAGATAATT TACCGAGCTC TTCAGCAAAA ACCATGTTAC ATACAGCATA 001120 001121 TTCCAAAGAA ATGAACTCTT CTGCAATTTA AATTATAAGT AATATGTTAT TTTGGATCCT AGAGAAACCA TTTTCTCTAC 001200 001201 ATTTCATGAG CATGGTTAGA AAAGAGTTTA CAAGAATTAG GAAGAGGGAA CAATTTTAAT GGTCAGAAAA GAATAAAATT 001280 001281 TATTCTAGTT CAAGAAGTGC ACACAAAGAA TATGCATTAA TCTAACAACT ATGAGATTAA ATCTTTCAAA AAGGTCAAAG 001360 001361 GAGGATTGAG AAGTTTACAG AGATGTCCAC GGCATTTTAT ATCAATCTCA AAGGTAAGGT CTGCATTTTT ATAAACCAAC 001440 001441 TTAAACTTCT GTTGAGATAG GATATTTTGT TTTCAAGCCA GAATTACCAT TAATCAAATA TGTTTTAATT ATCTGATTTA 001520 001521 GATGATCTAC TTTTTATGCC TGGCTTACTG TAAGTTTTTT ATTCTGATAC ACAGTTCAAA CATCATTGCA ACAAAGAAGT 001600 001601 GCCTGTATTT AGATCAAAGG CAAGACTTTC TATGTGTTTG TTTTGCATAA TAATATGAAT ATAATTTAAG TCTATCAATA 001680 001681 GTCAAAACAT AAACAAAAGC TAATTAACTG GCACTGTTGT CACCTGAGAC TAAGTGGATG TTGTTGGCTG ACATACAGGC 001760 001761 TCAGCCAGCA GAGAAAGAAT TCTGAATTCC CCTTGCTGAA CTGAACTATT CTGTTACATA TGGTTGACAA ATCTGTGTGT 001840 001841 TATTTCTTTT CTACCTACCA TATTTAAATT TATGAGTATC AACCGAGGAC ATAGTCAAAC CTTCGATGAT GAACATTCCT 001920 001921 GATTTTTTGC CTGATTATTC TCTGTTGAGC TCTACTTGTG GTCATTCAAG ATTTTATGAT GTTGAAAGGA AAAGTGAATA 002000 002001 TGACCTTTAA AAATTGTATT TTGGGTGATG ATAGTCTCAC CACTATAAAA CTGTCAATTA TTGCCTAATG TTAAAGATAT 002080 002081 CCATCATTGT GATTAATTAA ACCTATAATG AGTATTCTTA ATGGAGAATT CTTAATGGAT GGATTATCCC CTGATCTTTT 002160 002161 CTTTAAAATT TCTCTGCACA CACAGGACTT CTCATTTTCC AATAAATGGG TGTACTCTGC CCCAATTTCT AGGGAAAAAA 002240 002241 AAAAAAAAAA AGG |
Predicted Small Protein
Name | NONHSAT097559_smProtein_1163:1258 |
Length | 32 |
Molecular weight | 4032.8451 |
Aromaticity | 0.193548387097 |
Instability index | 44.7967741935 |
Isoelectric point | 10.9313354492 |
Runs | 5 |
Runs residual | 0.0399865591398 |
Runs probability | 0.0474121180005 |
Amino acid sequence | MLFWILEKPFSLHFMSMVRKEFTRIRKREQF |
Secondary structure | LEEEEELLLLLHHHHHHHHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |