NONHSAT097734
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT097734 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1492 nt |
Genomic location |
chr4-:108968729..108999508 |
Exon number |
4 |
Exons |
108968729..108969930,108985492..108985540,108991819..108991926,108999376..108999508 |
Genome context |
|
Sequence |
000001 GGAGCCAAAA AGACCTCACA TTAAGAAGCC TCTGAATGCT TTTATGTTAT ACATGAAAGA AATGAGAGCG AATGTCGTTG 000080
000081 CTGAGTGTAC TCTAAAAGAA AGTGCAGCTA TCAACCAGAT TCTTGGCAGA AGGTGGCATG CCCTCTCCCG TGAAGAGCAG 000160 000161 GCTAAATATT ATGAATTAGC ACGGAAAGAA AGACAGCTAC ATATGCAGCT TTATCCAGGC TGGTCTGCAA GAGACAATTA 000240 000241 TGGTAAGAAA AAGAAGAGGA AGAGAGAGAA ACTACAGGAA TCTGCATCAG CATTTCATTT GTTCCTTCTT GAGGTGGAAA 000320 000321 ACGAAGCTCA TTCCCAACGT GCAAAGCCAA GGCAGCGACC CCAGGACCTC TTCTGGAGAT GGAAGCTTGT TGAAAACCCA 000400 000401 GACTGTCTCC ACGGCCTGCC CAGTCGACCC CAAAGGAACA CTGACATCAA TTTTACCCTG AGGTCACTGC TAGAGACGCT 000480 000481 GATCCATAAA GACAATCACT GCCAACCCCT CTTTCGTCTA CTGCAAGAGC CAAGTTCCAA AATAAAGCAT AAAAAGGTTT 000560 000561 TTTAAAAGGA AATGTAAAAG CACATGAGAA TGCTAGCAGG CTGTGGGGCA GCTGAGCAGC TTTTCTCCCC TCATATCTGC 000640 000641 GTGCACTTCC CAGAGCATCT TGCATCCAAA CCTGTAACCT TTCGGCAAGG ACGGTAACTT GGCTGCATTT GCCTGTCATG 000720 000721 CGCAACTGGA GCCAGCAACC AGCACATCCA TCAGCACCCC AGTGGAGGAG TTCATGGAAG AGTTCCCTCT TTGTTTCTGC 000800 000801 TTCATTTTTC TTTCTTTTCT TTTCTCCTAA AGCTTTTATT TAACAGTGCA AAAGGATCGT TTTTTTTTGC TTTTTTAAAC 000880 000881 TTGAATTTTT TTAATTTACA CTTTTTAGTT TTAATTTTCT TGTATATTTT GCTAGCTATG AGCTTTTAAA TAAAATTGAA 000960 000961 AGTTCTGGAA AAGTTTGAAA TAATGACATA AAAAGAAGCC TTCTTTTTCT GAGACAGCTT GTCTGGTAAG TGGCTTCTCT 001040 001041 GTGAATTGCC TGTAACACAT AGTGGCTTCT CCGCCCTTGT AAGGTGTTCA GTAGAGCTAA ATAAATGTAA TAGCCAAACC 001120 001121 CACTCTGTTG GTAGCAATTG GCAGCCCTAT TTCAGtttat tttttcttct gttttcttct tttctttttt tAAACAGTAA 001200 001201 ACCTTAACAG ATGCGTTCAG CAGACTGGTT TGCAGTGAAT TTTCATTTCT TTCCTTATCA CCCCCTTGTT GTAAAAAGCC 001280 001281 CAGCACTTGA ATTGTTATTA CTTTAAATGT TCTGTATTTG TATCTGTTTT TATTAGCCAA TTAGTGGGAT TTTATGCCAG 001360 001361 TTGTTAAAAT GAGCATTGAT GTACCCATTT TTTAAAAAAG CAAGGCACAG CCTTTGCCCA AAACTGTCAT CCTAACGTTT 001440 001441 GTCATTCCAG TTTGAGTTAA TGTGCTGAGC ATTTTTTTAA AAGAAGCTTT GT |
Predicted Small Protein
Name | NONHSAT097734_smProtein_239:460 |
Length | 74 |
Molecular weight | 8267.4104 |
Aromaticity | 0.0547945205479 |
Instability index | 49.8383561644 |
Isoelectric point | 10.9398803711 |
Runs | 9 |
Runs residual | 0.0208572691118 |
Runs probability | 0.0375964199493 |
Amino acid sequence | MVRKRRGRERNYRNLHQHFICSFLRWKTKLIPNVQSQGSDPRTSSGDGSLLKTQTVSTAC PVDPKGTLTSILP |
Secondary structure | LLLLLLLLLLLHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLEEEELLEEEELL LLLLLLLEEELLL |
PRMN | - |
PiMo | - |