NONHSAT097791
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT097791 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1130 nt |
Genomic location |
chr4+:110605596..110608872 |
Exon number |
2 |
Exons |
110605596..110606523,110608671..110608872 |
Genome context |
|
Sequence |
000001 CAGGTGAAAG CTGGAATAGA AGCTCATTCG GAAGCCAAAA CCAGTGGACT CCTGTGGGCT GGATTGGCAC TGCTGTCCAT 000080
000081 TCAGGGTGGG GCACTGGCCT GGCTCACGTG GTGGGTGTAC TCCTGGGATA TCATGGAGCC AGTTACATAC TTCATCACAT 000160 000161 TTGCAAATTC TATGGTCTTT TTTGCATACT TTATAGTCAC TCGACAGGTG AGTAGTTTGT TAGGAAAATG GTAAGTTAGA 000240 000241 ACATCTTTGC AAAGAATGTC TTATCTAAGC AATGAGCAAA AAAGCCTTTT TATTTACTGA ATTACTGCCA TCTGGTTTTT 000320 000321 ATGAGCTGGT AAATTTTTTA TTGTTTTTCA CAAGACTGAA TGAAGACTCA CAACACAGAG AAATTATATA TAACTTCTTT 000400 000401 GGAGAAGTAA TTAGTGTAAC ACACAAATTC CTCCATTGGG ATAAATATGT GTTCTCTGTG CCCTCATTTA TAAAAAAAAC 000480 000481 TGAATTTGCA TTGCAAAACA TTCAGTAACA TCAGCTTTGC CTCATGGTTA TTTAATATGC CAAAAATCTC CCTTTTCTTA 000560 000561 TTTCTTCCTT CTTCTTTCCC ATTATGTGTA ATTTCTCTTC CCAGCTTGCC TGTTTTTGAA AGGAGCAGCA GATCTTAAAT 000640 000641 GAGACTAAAT GTTTTGTGTT GGCTTATGCT TACTCTCATG GCCATTGCAA ATATTTCACT CATTCATCTG CCTTCTTTTG 000720 000721 CTTTGGTGTT GCTGAGTCAA GTATCTTTCT TGCAGAGGCA TTATGTTCAT TCAAAACATG TTGTTTTCTT CTCTCTCTCT 000800 000801 TTTTTTTTAA GGATTATACT TACTCAGCTG TTAAGAGTAG GCAATTTCTT CAGTTCTTCC ACAAGAAATC AAAGCAACAG 000880 000881 CACTTTGATG TGCAGCAATA CAACAAGTTA AAAGAAGACC TTGCTAAGGC TAAAGAATCC CTGAAACAGG CGCGTCATTC 000960 000961 TCTCTGTTTG CAAATGCAAG TAGAAGAACT CAATGAAAAG AATTAATCTT ACAGTTTTAA ATGTCGTCAG ATTTTCCATT 001040 001041 ATGTATTGAT TTTGCAACTT AGGATGTTTT TGAGTCCCAT GGTTCATTTT GATTGTTTAA TCTTTGTTAT TAAATTCTTG 001120 001121 TAAAACAGAA |
Predicted Small Protein
Name | NONHSAT097791_smProtein_638:910 |
Length | 91 |
Molecular weight | 10307.139 |
Aromaticity | 0.111111111111 |
Instability index | 47.6822222222 |
Isoelectric point | 11.4389038086 |
Runs | 10 |
Runs residual | 0.0287477954145 |
Runs probability | 0.031478537361 |
Amino acid sequence | MRLNVLCWLMLTLMAIANISLIHLPSFALVLLSQVSFLQRHYVHSKHVVFFSLSFFLRII LTQLLRVGNFFSSSTRNQSNSTLMCSNTTS |
Secondary structure | LLLHHHHHHHHHHHHHHHHHHHLLHHHHHHHHHHHHHHHHHHHHLLLEEEEEHHHHHHHH HHHHHHHLLLLLLLLLLLLLLEEEEELLLL |
PRMN | LLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLHHHHHHHHHHHHH HHHHHLLLLLLLLLLLLLLLLLLLLLLLLL |
PiMo | ooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiTTTTTTTTTTTTT TTTTTooooooooooooooooooooooooo |