NONHSAT097920
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT097920 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1211 nt |
Genomic location |
chr4+:115379251..115412892 |
Exon number |
3 |
Exons |
115379251..115379383,115380369..115380535,115411982..115412892 |
Genome context |
|
Sequence |
000001 atgaggcatg gcctatctct tcctttctat catagcctga tgtagttttt caggttcctt tgggtcccct tggctgagag 000080
000081 tggagtccat tcggtcagct gggggaattt agacttttac ttttggttta caGGGTGAAT AACAACATCA AGAagaaaat 000160 000161 ggaagctatc agaaaagcct ctaccatccc caccacatct acctgtctac ctgtgtgtgt tcctaaactc cagcttctct 000240 000241 catgaaagaa ctctccatgc atctggctta aggtcatccc atccctgatc tccacttaag tagataactt gttttgcatt 000320 000321 ttacaggttc atggctggag ggagcttgcc ttgagactca aatgagattt tgaactttaa acgatcgagt tgttgctgaa 000400 000401 acaggtaaga ctttgcagct atagggtgat tgtatttcgt acttgaaaaa gacatgagtt tgaggggcca ggggccgaaT 000480 000481 GCTATtggtt tgactgtgtc ccctctgaaa cttatgttga aattggattc ccaatttggc agtgtttgga ggtgggccta 000560 000561 ctgcgaggtg tttgaaacat gggagtactg ccctcatgaa tagattaatg ctgtcttaaa ggagtaagtt cttgctcttg 000640 000641 cagaaattaa ttagttccca tgagagtggg ttgttataag tgagcccagc ctctcatgcg tgtccctttg cactcatctg 000720 000721 ctcgccttac tgcttgtctg ctatgttgtg atgtagcaca tggccctaac taaaaggtga gcagataaca gtatcatgct 000800 000801 cttggactag aattgtcacc agaattgtga aacaaatgaa tctattttct ttataaatta cccagtctca gggattctgt 000880 000881 tacggcaaca caaaatggac aaagacagga ggtaattagc attagataag atcctcaggg taggaacctc atgagattgg 000960 000961 cagctttata agaagaggaa gagagacctg agctggaaca tttgctctgt cttgccacat aatgtctctt gccaagtcat 001040 001041 gacacagcag gaaggccctc attagatacc tgtgccatgc tcttggactt cccagcttcc agaagagtga gctaactaaa 001120 001121 tctccattct ttataaaatt acccattctg cagaattgaa atatcgcaac agacaatatt ttaagacaAT TACATCTTCA 001200 001201 GACAATTAAG G |
Predicted Small Protein
Name | NONHSAT097920_smProtein_158:244 |
Length | 29 |
Molecular weight | 3001.6271 |
Aromaticity | 0.0 |
Instability index | 42.0464285714 |
Isoelectric point | 8.88580322266 |
Runs | 5 |
Runs residual | 0.0246478873239 |
Runs probability | 0.012012012012 |
Amino acid sequence | MEAIRKASTIPTTSTCLPVCVPKLQLLS |
Secondary structure | LHHHHHHLLLLLLLLLLLLLLLLLLELL |
PRMN | - |
PiMo | - |