NONHSAT098020
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT098020 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
580 nt |
Genomic location |
chr4-:119685568..119689402 |
Exon number |
2 |
Exons |
119685568..119686072,119689328..119689402 |
Genome context |
|
Sequence |
000001 ACATGTGCCC ATTTATGCAG TTCATCGAAG GAGGAAGGAG ATATCAGTGT GGATTTTGCA ACTGTGTGAA TGATGTTCCA 000080
000081 CCATTCTATT TCCAACATCT GGACCACATT GGAAGAAGAC TGGACCACTA TGAGAAACCA GAGTTATCTC TAGGATCTTA 000160 000161 TGAATATGTT GCCACTTTGG ATTATTGCAG AGTAAGTGTT CCCAGAACTT CAAGTGTTTA TACATTGATG TTAAATTCAA 000240 000241 GTGAATAACT TTCATATGTA AAGAACTGAC TCTTGATTCA CAAACAAAGC ATTTTGGTGG TACCATGGAG TGGTAGAAAT 000320 000321 GCCTAAGACA CAGATCCCAT CTCCTAGGTT GTTAACATGA TTCAACTGCC AAACCATCTA CTGGAGGAAT TATTTTTAAA 000400 000401 AACTGAAATG TGGTGTCAGA AATAGAAAAC AATAATTTTT TATGTCCTTG CCAGACAGAA TATACCTGGT TCTTAATGCA 000480 000481 GTAGTTCCGT ACAGTGCCTC TGCCTCCCTT ATTTTGTAAA GAGTCTCAGA AAAACTTCCC TTCCAAGAGA AAAGCTCAAC 000560 000561 CAAAATGGTT AGTAGGACTA |
Predicted Small Protein
Name | NONHSAT098020_smProtein_2:247 |
Length | 82 |
Molecular weight | 9482.6862 |
Aromaticity | 0.148148148148 |
Instability index | 58.6754320988 |
Isoelectric point | 5.84222412109 |
Runs | 15 |
Runs residual | 0.0430054778841 |
Runs probability | 0.0471235941824 |
Amino acid sequence | MCPFMQFIEGGRRYQCGFCNCVNDVPPFYFQHLDHIGRRLDHYEKPELSLGSYEYVATLD YCRVSVPRTSSVYTLMLNSSE |
Secondary structure | LLLLEEEELLLLEEELLLEELLLLLLLHHHHHHHHHLLLLLLLLLLEELLLLEEEEEEEE EEEEEELLLLEEEEEEELLLL |
PRMN | - |
PiMo | - |