NONHSAT098070

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT098070

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

1658 nt

Genomic location

chr4+:120375983..120465272

Exon number

12

Exons

120375983..120376288,120381338..120381397,120381886..120381982,120382872..120383006,120384051..120384134,120414488..120414592,120415588..120415678,120418966..120419058,120433506..120433619,120433968..120434125,120449895..120449944,120464908..120465272

Genome context

Sequence
000001 CGCGCTTGAG CGGACGCTGC CTACCGGTGG CCGGGCGGGA TGTAACCCGC TGCTGAGCTG GCAGCTCTGT GTCGCTAGGC 000080
000081 TTCGGCCCGG CCGCCGCCGC ACATAAGCTG CGAGGAGGAG CTTTACGACT TCCCGGTCTT CGGGGCCGGG CGCAGCAAGG 000160
000161 GCCAGACTCT GCGCTAGCAG GCGCTGCGCG CCAACCGGCC GGCACCTGTC GCAGAAGGTG CAACCGATCG CACTGTCGCG 000240
000241 CCGAAGCTCC TCAATGGCCA GCGCCAGCTG CAGCCCCGGC CGCCCACTCG CCTCACCTGA GCCTGGGAGC TTGAAAAATC 000320
000321 ACATTTGAGA AGAGGATTGG ATCCTAGCCA TAACATAAAT ATAAGGGTGG AACCAAAGTT TTAATCAAAG AAGGTGGTGT 000400
000401 TCAGTTGCTG CTTACAATAG TTGATACCCC AGGATTTGGA GATGCAGTGG ATAACAGTAA TTGCTGGCAG CCTGTTATCA 000480
000481 ATTACATTGA TATTAAATTT GAGGACTACC TAAATGCAGA ATCGCGAGTG AACAGATGTC AGATGCCTGG TAACAGGGTG 000560
000561 CAGTGTTGTT TATACTTCAT TGCTCCTTCA GGACATGGac cattacataa ctgaagactc ccaccttcag gcaggattgg 000640
000641 gtagtacgtg tttgtaacta cctggcattg cctttTGTTG AGGAAGGGTA GATGTCTACC CAAATGGAAT ATTGAGTATC 000720
000721 AGAGACTTCA AATGATAACT TTTGTTTGTT TGGAGAAAAT CTTGAGGACG TGATCACTGT ACAAAAGCAT GGCAAAATGA 000800
000801 GGAAACCACT GACAGGTGAA GAATTTGCAC AATGGAAAAC CACCTTGACC ATCTCATGAC TTTATACAGG AATCGGAGAC 000880
000881 ATCCAAGGCC ATTCCATTTC TAAATCACAC TTATCCCTCA ATCAAGTCAG TGACTGGATC ATCTCCTAAG GTTTCACCTG 000960
000961 CTTTGCATCA GTGAGTTGGA CTATGGATCA GGTACTGTGC TCAGCATCAG AAAATGGGAT GACAATGAAC AGAGTAACAG 001040
001041 GACTATATTT CTGAAAAAGG ATGAACTTAC TGGAAACAGG ATTGCgtgcc tgaaatatat ccaaatggat ataaatgtca 001120
001121 actcagttct gggctggaga tatagatttg gaatgcacca acaatgcaga tggtaatcct ggcatgcgag taggtgagat 001200
001201 catccaggga gATGGCCTAt aatgagagcc tacaacatgt cagGGCTCAA GCACCTCTTA CTGCCTCCTC ACTCTGGAAC 001280
001281 CAAATGCCTT ACTgtctgca ctgctcccca ttgccttccc tcccgcctca ccagttgatc cctatacctc cttcccaatg 001360
001361 acctccagga ggcctctaac ttacaggtga ggcaggcatt tttctattcc cttaacatga ccagttggtg tatcatggta 001440
001441 aattttattt ctctctctct ttctagactg tcagtatctt gggcttagag ttttatttat ttttttcagc tccacttcag 001520
001521 ctggcaaaac gcctagcata tagtaggaac taaaaaaatg ttttccgaat taatgaaAGA ATGTAGAATT GCAGCTCTGA 001600
001601 CTGTAACTAG TTTCCCATGA AGACTATAAT AGTCTATTAT CCTTTATTTT TCCTGGAG
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Predicted Small Protein

Name NONHSAT098070_smProtein_1211:1360
Length 50
Molecular weight 5464.2837
Aromaticity 0.0612244897959
Instability index 84.7755102041
Isoelectric point 6.79901123047
Runs 7
Runs residual 0.019194704909
Runs probability 0.0235697882757
Amino acid sequence MAYNESLQHVRAQAPLTASSLWNQMPYCLHCSPLPSLPPHQLIPIPPSQ
Secondary structure LLLLHHHHHHHHLLLHHHHHHHHLLLLEELLLLLLLLLLLLLLLLLLLL
PRMN -
PiMo -