NONHSAT098132
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT098132 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1719 nt |
Genomic location |
chr4-:121952576..121954272 |
Exon number |
1 |
Exons |
121952576..121954272 |
Genome context |
|
Sequence |
000001 GGGCACATGC GTGCACGTGC ACACACACCT ACACTTTTGT ATATATTCAA GGGATCCATT GTAGCTGAAA CCAATCCAAT 000080
000081 ATCTCTTCCA ATATTTTACC AATCCCTTCT AGAGATTATC TAGTTCTACC ATCTCATTTT ACAGATGAGG AAATTGAGGC 000160 000161 CCAATTAAGA CTAGAATCTA GATTCTCTTA CTCCCAGTTT AATGTCCACT CAGGACTTCA TCTTAAGCAC TTCTTCACTA 000240 000241 TAGAAAGCAT GGGACAACTC ACCCAGAGTA TACTTCTTTG TCTCTATTCA CTGGCTGGCT TCAAAACAAC ACAAAAGCAT 000320 000321 CTAACTTGGA GGACAATGTC ATCTGGAGCA TCTCCAGCCA CTTCCTTCCC CCACTCTGAT ATGGTGTGAC AGAGGTACAA 000400 000401 CTGGCTGGGA GCCTGCCTTC TGGCCCTCTC CCTATGACCA AGTAGAGTGA CCACTGCCAG ACTTTAGCTG ATCTCTATAT 000480 000481 GTAGTCGACC AAATGACCTG GGAAGCATCA AGGCACCCTC ACAACTGTGT TTCCCCAGAG AGTTTTAGCC AGAAAAATAC 000560 000561 AGAGTCTTTG GGGATTTGGG CCTTTGTTGT TTTGAAAGTG GGAAGTAGGA GAAAGAACAG GGAGAGAAGT AGGTAGGGTG 000640 000641 TGAAGAGAAG TATAATTTTA TCTCATTTCT TTCTCTGAGA GATCTAAGAA GTCAAGAGAC ACAAGAGATC CAGTGTAACT 000720 000721 TGATTTTATT AATGTTTGCA TTCTGTCCTT CATGTAACCT TACGCTGGAG TATTGGACCT GGATCACCAT CCTCTCTGTC 000800 000801 AGAATTGCGT CTCACTGATG AACATTTTCA TTTCCCAGGA GTGGTTGATC ATGCATCTTG GCAAATTTCC CTCATTTCTC 000880 000881 TTTACAGTCC CCATTCCTGA CCTTTGAGAA ACAGTCATCA AAGTGTAGAA GTAAAGTCTT TTAAAATGCC TTTCCAGATG 000960 000961 GACCCTTAGA ACTCTTTCAA AGATATTTGT AAATATTCAC TCTAAATGTA ATAGAAATAA AAAGCTGTAG ATCTTCATTA 001040 001041 CAGAAAAACC ATTAGCTCAA GATTGAAGAG CTCACAGTCT TAGGCACAGT TTCATCTTAC GCTGTCATTA TTTAGATCCC 001120 001121 AAGAAAGAGA GGGTGGGATT GGCTATCCCA CAGTATAGCG GGGAGGAGGG CAGTGCAGGA AAGGACATTG ATTCCTAGTA 001200 001201 AAAGATCCAT TAAAAAACAG AAATAAGAAT GAAGTACCAG AACGTAATTT ATCATCCCTT TATGCTACAG AAGAAAACTT 001280 001281 GCAAGACAGT GTAAGGTTTC CCTGGAACTT GTTAGAAATG TCATCTAGAC GTTGAGCCAG GAACACAATC AAGCAACCTT 001360 001361 TCAGGATATA GCCAGGCCCC AAGCCTCTTC AGAACTGGGA ATAATGTTTT GAATTGAAAC AGAGGTGTAA AGCAGAGAGG 001440 001441 TCAGAGCAGA TCAATACTGG TTATGGGTGA TGAGATCCAG ACAGAACAGT CCCCAGAAAA ATAACTGTCT TACAACGAGG 001520 001521 GGGTGTGATG GATGTGTTAT TTTGTTTTTT TTGAGTCTAG TAGTATTACT GTCTGAAACT GGTCAGTTTT TAGGGGCAAC 001600 001601 TTCAAAATGT TATTTGTGTC TTTCTTGTAA ATACCTGCCA AGATTAATAC CCAATCAAAT GCCATGACTT GGAAATAAAC 001680 001681 AAATATTCAT TTCTTATCTA CAAAAAAAAA AAAAAAAAA |
Predicted Small Protein
Name | NONHSAT098132_smProtein_1469:1666 |
Length | 66 |
Molecular weight | 7272.5859 |
Aromaticity | 0.0769230769231 |
Instability index | 51.2046153846 |
Isoelectric point | 9.12176513672 |
Runs | 10 |
Runs residual | 0.00355769230769 |
Runs probability | 0.069616675499 |
Amino acid sequence | MRSRQNSPQKNNCLTTRGCDGCVILFFLSLVVLLSETGQFLGATSKCYLCLSCKYLPRLI PNQMP |
Secondary structure | LLLLLLLLLLLLEEELLLLLLEEEEEHHHHHHHHHHLLLLLLLLLEEEEEEELLLLHHHL LLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLL LLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTToooooooooooooooooooooo ooooo |