NONHSAT098145
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT098145 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1293 nt |
Genomic location |
chr4-:122551405..122588711 |
Exon number |
3 |
Exons |
122551405..122551756,122556858..122557282,122588194..122588711 |
Genome context |
|
Sequence |
000001 GCCTTTCAGT TTTCTGTTTT CAAACTGCCA TTTCAGTTGG TGTCATTTTT CTTTTGTACT TATGCCCTTC TGGTTGCATT 000080
000081 TTTTTTTTTA AAGCCAAGTA ATTGCCATTA ATAAGCTTTT TTAAATAAAA TGAACTAATC TTCCTTTGAA AACTTTAAAA 000160 000161 TAGTGATAAT ATTCTTTTCA CCACCGTTGA TGCTCATCAG AATAACCAGG GGAATCTTAA AAACTGTATG TGTACACATG 000240 000241 ATATTGGATT TTTGTTTTTT TGAGAGGCCT CATAGGCAAT TTTAATGCAG AGGCAAGTTG AGAATCAGTT GGTTATACTT 000320 000321 TTCACATAGA AGATGATATG TTTCAAAGAG CTCTGTTCTG TTATTGAAAA TAGGCCACTG GCTTTAAATA TAAGCCCTGG 000400 000401 ATTATTTATT AGTAACACTT TAAGAGAAAT CCACCTGTGA GCTTTAACAT TTGCTATATT TTCTGTAGGT CTGGATCTGA 000480 000481 AAATTTATTA ATAAAAGAAT TAAAAAAATA AAAATCCTAA TCTTGAATTG AGGGGAGAAC CCTGGCACCT GGAAAGGAGA 000560 000561 ACTCACTGGA AGTAGCAAGA TGAACCATCT GTCTTAGAGA TATTAAGTTA CTAGGGGGCT TCCTAAAAAT GACAAACAAG 000640 000641 AGAGAGTAAT CAGTGATTGG AACTGGTGCT AGAAGGTACT AGGCTACATG ATAAGGCTGG CTTGGTACTG AATGCGAGTC 000720 000721 CAGCTTGCCC CAGAATGCCA AGGTCTGTCT TACACCTATG GATGGAAAGG GCAGAGCCTG CAAGTAGGAG CCAAGTGGTT 000800 000801 CCAGCGAGGG GGAAAGGAAG TCTTCAGATT AGAGGCAGGG AGTCCAGTCT GAAAACGTGA TGCACCTGCC ATTAGTGATG 000880 000881 GTACCTGTGA CAGCATATGT GCCCTTGGCT TGTCACCTGG CATTGAATGC CTGCCCTGCC CGAACTTGAC TACATAGTCT 000960 000961 TCTCTTTCTA GTTGAAGACT GGATTCTTCT TGAAATTGAC TGCATAGTCT TCTCTTTCTA TTCTTTGAAT TCTTATTTGG 001040 001041 ATTTCCTTAG CACTGTGTTC AGGAAATGCT ATCATTCCTT ACAAGCACCA TCAGCATAAT AATTTACTTG AATGACCATA 001120 001121 TGTGGTTTTA ATTCTGTATT TTCAGAGGCT TTCAGAAGGA TGTTTTCTTG CAGTTTTACT GCTTTCATGC CTAACATCTT 001200 001201 AGTCCAATCT GGATGCTATA ACAAAAATAC CACAGACTAG GTAGCTTAAA CACAGAAATT TATTTTTCAT AGTTCTGCAG 001280 001281 TCTGGGAAGT CCA |
Predicted Small Protein
Name | NONHSAT098145_smProtein_734:859 |
Length | 42 |
Molecular weight | 4603.2976 |
Aromaticity | 0.0243902439024 |
Instability index | 84.9585365854 |
Isoelectric point | 11.7113647461 |
Runs | 9 |
Runs residual | 0.0435433188688 |
Runs probability | 0.0468213311351 |
Amino acid sequence | MPRSVLHLWMERAEPASRSQVVPARGKGSLQIRGRESSLKT |
Secondary structure | LLLHHHHHHHHLLLLLLLLLEELLLLLLEEEEELEEELLLL |
PRMN | - |
PiMo | - |