NONHSAT098164
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT098164 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
883 nt |
Genomic location |
chr4+:123249027..123254964 |
Exon number |
3 |
Exons |
123249027..123249512,123252481..123252696,123254784..123254964 |
Genome context |
|
Sequence |
000001 AAGTAAAATT TCATTCTGAT TTTTAGTATG TCAGTAGTGT AACTTTCTGT GGTTGGCCCT TTTGCTTCCT TCCTTGGTGT 000080
000081 ACTATTTCAT ATGTTCATGA ATCTGACCTT TCTTTCAGTT CAGAGTGAAG AAATTCAACT CTGAGataat ttttaaatgt 000160 000161 ttaaatttat atattttttc tttttttaat tGAAATATGA ATCTGATTCA TGTTTTTTCT TTTTACAATC AGTTTCCAGA 000240 000241 GGAGACAGAA CTGGACCTTT TGTCAGTAAC CATTGAAGGT CCATCCCATT ATTCATCAAA TAGTGAAGGA TCATGTTCTG 000320 000321 TGTTCAGTTC TCCCAAAACT CCAGGAGGCT TTTCACCAGG CATTCCTTTC CAAACTGAAG AGGGCCGACG GGATGACAGT 000400 000401 TTGTCTTCTA CCAGTGAAGA TTCCGAGAAG GATGAAAAAG ATGAAGACCA TGAGAGGGAA AGGTTTTATA TTTACAGGAA 000480 000481 ACCCTCACAT ACGTCTCGTA AAAAAGCAAC AGGCTTTGCT GCTGTTCATC AGCTATTTAC AGAACGCTGG CCAACAACAC 000560 000561 CAGTCAATAG AAGTCTTAGT GGCACAGCTA CAGAGAGAAA TATTGACTTT GAACTTGATA TACGGGTTGA AATTGATAGT 000640 000641 GGAAAATGTG TACTCCACCC AACCACCCTT CTACAAGAAC ATGATGATAT AAGTTTGAGA AGGAGTTATG ATCGAAGTTC 000720 000721 CAGGAGCTTA GATCAAGATT CACCTTCAAA AAAGAAGAAG TTTCAAACTA ATTATGCTTC TACCACCCAT TTAATGACCG 000800 000801 GCAAGAAAGT GCCATCATCT CTACAGACAA AGCCTAGTGA CTTAGAAACA ACAGTATTTT ACATTCCCGG AGTTGATGTA 000880 000881 AAG |
Predicted Small Protein
Name | NONHSAT098164_smProtein_392:691 |
Length | 100 |
Molecular weight | 11516.8572 |
Aromaticity | 0.0808080808081 |
Instability index | 50.6465656566 |
Isoelectric point | 10.3422241211 |
Runs | 15 |
Runs residual | 0.017825311943 |
Runs probability | 0.0383088971325 |
Amino acid sequence | MTVCLLPVKIPRRMKKMKTMRGKGFIFTGNPHIRLVKKQQALLLFISYLQNAGQQHQSIE VLVAQLQREILTLNLIYGLKLIVENVYSTQPPFYKNMMI |
Secondary structure | LEEEEELLLLHHHHHHHHHHLLLLEEELLLHHHHHHHHHHHHHHHHHHHHHHLLLLLHHH HHHHHHHHHHHHHHHHHLLEEEEEEELLLLLLHHHLLLL |
PRMN | - |
PiMo | - |