NONHSAT098184
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT098184 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1849 nt |
Genomic location |
chr4+:124326623..124444474 |
Exon number |
7 |
Exons |
124326623..124326995,124327986..124328561,124411423..124411667,124417896..124418099,124426434..124426774,124436227..124436267,124444406..124444474 |
Genome context |
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Sequence |
000001 GGTTTAAACC TAGGAAGAAG AAATATAAGA GTGTGTCCTC ATAAGAGCTT ATGGGCCCTA GGCTCTTGAA CCTAATGCTG 000080
000081 ATCATCATTT TAAAGTGCTT AGACTTTGAA AGCATCAGCT GAAATTTTTT ACAATGCCGC TGCCACTTAT TTAATACTGT 000160 000161 TGAATGAAAA ACAACATGCC AAACAGATGG GATAACCTTT TTATTCCACA CATTTGTCCC TCTTCCCCTA CTAGTACAGC 000240 000241 TTGACAGAAT GGATGTTTTT GTTACCTGGT TCCTTTCCAG TATATTTTCT GACTGCCAAT TTTTTCATTT CAAACAAGCC 000320 000321 TTATTTAGAT AGTTTAATAG TGAATAAACC AACATAGGAC TTTTGTAATT GAGAGAAAAA CTGTCCATGT TTTAGCAAGG 000400 000401 GTAAAGCCTG AACTCTTTCA TCTGACACAG GATTTTCTTC ATTTCTTGTT TGTTTGCTTT TTGGGATGAG GTCTCGATCT 000480 000481 GTCACCCAGG TTAGAGTGCA GCAGTGGCTT GATCACCACT CACTGCAGCC TCAACCTCCT AGGCTCAAGC AGTCCTCCTC 000560 000561 TGCCTCAGCC TGTGAAGCAG CGGGGACCAC AAGCAAACGC CACCATGGCC AGCTATTGGT TTTTTTTTTT TTTTTAGTGG 000640 000641 AGACAGGTGT CTCCTTATGT TGCCCAGACT GGGCTTAAGC TGTCCTGCTT CAGCCTCCCA AAGTGCTAGG ATTACAGGCG 000720 000721 CAAGCCATTG CACCTGTCCT CATTTCTCAG CAGCCAACTC AATCAGTGTC TTTCTGCTGC AATTAGCCCT TACTATTCCA 000800 000801 TCCTCTTTAC CAGAAAATTT TTCCTTCATA ATATATTTGA CCATAATTTA GGAAATGAAA TGTTTTTCTG CATATATTAT 000880 000881 TCATGCTTAG CTATCAGGAA TAAGTAGTAA ATGACTTCAT TGCCGTGATT ATTTTTCATA TGTTAATATA CTGCAAGCTC 000960 000961 CGCCTCCCGG GTTCACGCTG TTTTCCTGCC TCAGCCTCCA GAGTAGCTGG GACTACAGGT GCCCGCTACC ATGCCTGGCT 001040 001041 AATTTTTTTG CATTTTCGTA GAGACGGGGT TTCACTGTGT TAGCCAGGAT GGTCTTGATC TCCTGACCTC GTGATCCGCC 001120 001121 TGCCTTGGCC TCCCAAAGTG TTGGGATTAC AGGTGTGAGC CACCGCGCCC GGTCGAGTTT TCTTCTTTAA TCTGGTGTTG 001200 001201 ATCCTGAGAG TGCTTTGTTA AAAAACATTC TCCATGCTGA CCTCCGTTTT CGAGTCCGCT TCCTGGGGAA ACCTGAAACA 001280 001281 GGACTTGATG CTAGCAGCTG CCCAGAAGAA CCAGATGGGC CACTGTCCTT GCCAGAAGAT CTGATATCCT GTGTATGGCC 001360 001361 ACCACCTAAC ACTGCTCACT TCTACATGTA AACCTCAGAG AGCATCCGCG AGAACTTCCT TCTAAGCTAA ATATGTCATC 001440 001441 TAGCACCTGA AAAAATTTAA GTCTGGTTCT TTCTGGATAA AAGAAAGCGC ACAGGATTTA AGTGAGTAAA TACTTAAGTG 001520 001521 AGTAAATTCT TAGAAAAAAC AAAACCTAAC CGCCACAATT GGACTTTGGA ACTTTTTTCC CCCCTTAGCA GCAGGCTGAA 001600 001601 ATTTTCAGTT CCTCGGTCAC TGATCAGGGA ATTCTGCGCT TCAGGCTGTG TACACCCGCA AGTCTGGAAG GGTGATGATG 001680 001681 ATGATGTGAT GATGAGTTAG GGCAATTATA ACTACGGCAA AAAAAAAAAA AAAAAAAAAC ACCATGATCA AGTGGGAAAC 001760 001761 ATCTATCTTC TTAAATGCAG AAGAAGAATG TATGTAACAA GTATGCTAGA CTATAGAAAA GACTCGAAGC CCTTACCGCA 001840 001841 GTCAGCCCA |
Predicted Small Protein
Name | NONHSAT098184_smProtein_656:850 |
Length | 65 |
Molecular weight | 6779.8784 |
Aromaticity | 0.078125 |
Instability index | 50.53125 |
Isoelectric point | 7.77655029297 |
Runs | 7 |
Runs residual | 0.03921875 |
Runs probability | 0.043177631413 |
Amino acid sequence | MLPRLGLSCPASASQSARITGASHCTCPHFSAANSISVFLLQLALTIPSSLPENFSFIIY LTII |
Secondary structure | LLLLLLLLLLLLHHHLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHLLLLLLLLLLEEEEE EEEL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLL LLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTToooooooooooo oooo |