NONHSAT098220
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT098220 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1738 nt |
Genomic location |
chr4-:126602332..126604823 |
Exon number |
2 |
Exons |
126602332..126603636,126604391..126604823 |
Genome context |
|
Sequence |
000001 TCAGGACCCA GACATAGGCT CCACTACCAT AGCCATTCAT GTGATGGGCA CAACTAGGAC AGAGGTGGTT GCCAATACCT 000080
000081 CTTCTCCAAA GTATAAtcat tcaaagagta aatatctatt gaacagacta agtgccaagc tctgttttaa gctctgTTTC 000160 000161 AGTCTCCTCA AAGGGGCTTA TGATGGAACT CTACAGCTGC AATTTCAGCA TCTGCATTTG CTCCTTCAGA GGTTTTTGAA 000240 000241 CTGGATTTGT TGTATATAAG CCTGCTACTC GTTTCACTCT AGAAGGAACA AATACAAGAA TGGCGATAAC TGTAACTGCT 000320 000321 GGATTAACTC TGGGAATGCC AGCCAGTGTC TACAGCTGTT AACAGGTGCC AGTTTAGGAT TCAATGGGCC TATAGCAAAT 000400 000401 GCTGCACCAT TTACTTTAAC TCTTACTTCT ACTtcgtaca gtggggggac aagggaaact ttcccgtttc aACAACAACT 000480 000481 CTAGCAGCTC CCAAGGGATT TACTCCAAAT AATTTGGGTA GAAAATAACA ACTACAAACA TATCAGCAAA TGTCTCTCTA 000560 000561 AGAAAAGCCA TTGCTGGCTT GGTCAGCTTG CTCTTCCAAA GTACAGACAC AACATCAAGA CATGGGCAGG AGGTTATAGG 000640 000641 TATGACTTTG AAAACTGCTG TAGCTACTTC AGCTGTAGCC AGTGAGGAAC TAGGTGGGGT ATACTTATTA CCTCATAATA 000720 000721 TAAAAAGACT GATAGAAAAG TGATAAAAGG ATAATAAACC GCTTAAGGAC AAAAATCGTC CACATGTCAG GATATAGAAA 000800 000801 TTCTCAAGAA ATTGTAAATA AACAGAAAAT AGATTTTAAA AGGAAAATAT TAAAGCAATG ATAAAAGTGT AAGAAGATAT 000880 000881 TAAGGTAGCA GAGCAGCTTC TGCCATTGAC TGCCAGTGGA TGAGAGAAAA ATTCCTCAAT CTCAACAATT TGAAAATAGA 000960 000961 AATTGCTCAG GAGTTAAATG AAGCAGCCAT AGCTCTCAGA ACCTGGAAAC TATTACCAGG ACTTCAAAAC GAAGATACAA 001040 001041 CTTCCGCACA CTACTTCACA ATCATGGCTC AGAAGTTTCA GGGGTAGCTT CAAAAGTACA GACAACAGAT TGAATAACTA 001120 001121 GCAAAAGAAC CTTCTTGCCA CTCAAGCAAT TAGTTCTCGT ATAACCCTGC AAGATTTATC AAGAGTTGCA CAGAAAATAC 001200 001201 ATGAACATTT GTAGCTTTGG CTGTGCGACC TTGGTCCATT ATTAAACAGG TAAAGGTATT CAAAGAACAA TGTCTTCAGC 001280 001281 ACAGAAAAAT GTTGTTGGGA AATGCTATAA ATGTGTTTGA AGCCAGAAAA CAGAAGCCAA GAGGTGGCAG AATGCATGCA 001360 001361 GTTATTACCA GACCCACCCC TTTCAGCAAC ATGCAAATGA AGCAGCCTTC ACCTCAACAC TTAGCAGCCT CAGCTGGTAG 001440 001441 CAGGGTTTCA GCTGTTTCTA GGGCTTAGTT TGGTACACAT TCAACTCAGC TATTGGCAGA AAAAGTACCA GCAAGGCCAC 001520 001521 ATTTGGATTT GGAAAAATAA ATAAACCTTC AGAAATCTTA GTGCAAGCTT TGGCAGCTCA AATAACATCT GCATTTAACT 001600 001601 TCAGCAATTC TGGCATCACA GTACCCGTTG GTTGGACATA CAGGATGTCT AATCCTGTCT CTGTAGGTTT TGGAACAGGA 001680 001681 GGGCAGCTCT TTCAGTTGAA GAAACCTCCA ACTGGAAACA AAACAAGAAA AATGGTAA |
Predicted Small Protein
Name | NONHSAT098220_smProtein_641:742 |
Length | 34 |
Molecular weight | 3554.1629 |
Aromaticity | 0.030303030303 |
Instability index | 70.3696969697 |
Isoelectric point | 8.21160888672 |
Runs | 7 |
Runs residual | 0.0279973649539 |
Runs probability | 0.0155197214021 |
Amino acid sequence | MTLKTAVATSAVASEELGGVYLLPHNIKRLIEK |
Secondary structure | LLHHHHHHHHHHHHHHLLLLEELLHHHHHHHHL |
PRMN | - |
PiMo | - |