NONHSAT098243
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT098243 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2539 nt |
Genomic location |
chr4+:128758922..128761885 |
Exon number |
2 |
Exons |
128758922..128760428,128760853..128761885 |
Genome context |
|
Sequence |
000001 TCACCTCTCT AATTTAAAAT GCATGAAAAT TAATACTTTG TTTTTGTTTT TTTTTTGGAA ACAGTCTCAC TCTGTCACCC 000080
000081 AGGCTGGAGG GCACAATCTC TGCTCACTGC AACCTCCACC TCCTGGGCTC AAGCCTCAAG CAATTCTCCT GCCTCAGCCT 000160 000161 CCCAAGTAGC TGGGATTACA GGAACCCACC ACCACGCCCA GCTAATTTTT GTATTTTTAG TAGATGGGGT TTCATCATGT 000240 000241 TGGCCAGGCT GGTTTTGAAC TCCTGACTTC AAATGATCCA CCCACATCCA CCTGCCAGAG TGCTGAGATT ACAGGCGTGA 000320 000321 GCCACCGCAC CTGGCCAATG TTCTTTTATA TACTCATGTT TTCTAACAAA ACAGCTTTGG ATTTATAATG CTGCCAGATG 000400 000401 TCATTACAAT TTTTTTTCTA AATTCAAAGG TAATTATTCT AAACAATAAA AGGGCACCTG GAATTTTCAG AACATTAAAA 000480 000481 AACTGAAACC ACTTAGAAGA AAAGAAGAAA CCTAAATGTC TGTGGAAGTG ATCAGTATTA AGTGGGTGAT GGCTCTTTCA 000560 000561 TCTTCCTTAT CCCTAAAGAT ACTTCCAACA TATTGTTAGA GTAAGTATTA AAAGAAAAAG TAGGTTTGCT GAAAAACATT 000640 000641 ACTAAATGAC TTGGAGCTCT CCAGTCAAAG AAACAAAGCT AATTGAAATA ATGTACATTT GGTTCAGTCT GTCAGGCAAG 000720 000721 TACAAATCCA TAACAAAAAA AATTAATAGT ATGCTCTTTG CTTTGGAATC TCTAATTTAC GGTCATGCCC TAAGTCACAG 000800 000801 GATGATTATT AGGGAAATGT CATTGACACC TGAAAATTAC CTATCCTGTA AAAAGACTGG TGAAATTCAA CATGTTTTAA 000880 000881 ATAATTTAAT TGCATTATAG CATATAAACT ATAAATGAAA ATGATCTTTG TCTTTCCTTT ATCTTGCTTT ATCCTCTTAT 000960 000961 CCAATTCTAG ACTCTTAAAT AATCACTGTA TTTTTCTCAA GTATTTGTTA TTTTTTATTA TCCTTTAGAT CTTTTTGTTC 001040 001041 ATGGCTCTTT AAAAATAGTT TTACTGATAA TCCAATCACT TGGATAGTTA ATTTTATTAC TTTTTGTTTC CTTTTTAATA 001120 001121 TTTATTCTTC CCGTTAAGGG TTTTTTGGCT ATAAATTCGT ACTTGATAAG CTATGTTATT TCTTTGTGTA ATTTAATAGT 001200 001201 AGCATTCTGG AGTAGATTCT TTTTTTGTAT TCTGGCCTTG GAATACTTTA ATTCCGGACC AAAAGAGGTC AATTTTGTGA 001280 001281 GTATTGCCTA TTAAGTAAAC AACATCCCTC ATTTTTAATC CAAATATCAA TTTGACAGAA TAACAAGGGT CAGAAATTCA 001360 001361 AAATAGCTGT TAGACACCTT TGATTCTTTG CTGCTCTCTG GTTATGTATG TGTGTTGTGC ATCTTCCTTG TTGTTTTAGA 001440 001441 GTTTCCTAAA TTTTTTGCTT CTGGGGACTT GAGTATTTTT AAATGTTCTT AAAATTATAT GAATCTAAAA AAAAAAAAGT 001520 001521 GTAATTAGAA ATGGAAATCT AGGTAAAGGA AGCTTTAAAA TGTTGTATTT TTTCCCTGAA ATAAACTTTT ATGATTTAAT 001600 001601 GTCTTGGAAA AAGACTCACA TGAAAAGTGG CTTTTATATT TGGTAGGATA AAGCCATTGT CCTTTAATAC CATAGCAAAT 001680 001681 AGAAGCAATT TTTAATGAGG TTACTGAATT GTTTAGTATT CCTAATATGG CATCCAGGTC ATCTTTTCTT TTCTCCAACC 001760 001761 ATTATTAAAA TAACTTGACA CTTTGGGAGG CCAAGCTGGG CAGATCACCT GAGGTCAGGA GTTTGAGACC AGCCTGGCCA 001840 001841 ACATGGTGAA ACCCCATCTC TACTAAAAAA AATACAAAAA TTAGCGGGGC CATGGTGACG TGCACCTGTA ATCCCAGCTA 001920 001921 CTCGGGAGGC TGAGGTGGGA GAATAGCTTG AACCTGGGAG GCAGAGGTTG TGGTGAGCCA AGATCACGCC ACTGCACTCC 002000 002001 AGCCTGGGTG ACAGAGCAAG ACTCCATCTC AAGAAAAAAA TAAATAAATA ATAATTTGTG TATGTGATGA CTGACTCTAG 002080 002081 TCATTATGGA AAATAACTTT TGGCAGTTTA GTTCCTATGT TAACAATTCC TCTTTTTAAG AGAGGTACTA CATTTGATTT 002160 002161 CTCAATTTCT CAGTTTGTTT TCAATACAAA CAGCAACCAC TGAAATGCAG AAAATGGTAA TCAAGTGTGA TGTTTCTATA 002240 002241 AAAATAATTG AGATTCACAT GTAATAGACC CTTTAGCTTT AATGAGCAGA CATGAGAATG GTTTATGATC TTAAGTTGGT 002320 002321 AACATAGGAA TATGTATTTG TCAATTTTAG TTCACAAACA TATCCATAAG AATGTTTACA CATGGCAGTA TCAAAGCATA 002400 002401 TAAAATATTT TCTATGTAAG TAAATTGCAT CTTTATGCTA GTGAACAAAG TAGCAATAAA TGTTCATTTT TGGATGGCAG 002480 002481 TACACATTGT TAACAATCGT GTAATTATAA TAAATATGTC TACCTACTCC TTGAACCAT |
Predicted Small Protein
Name | NONHSAT098243_smProtein_914:1027 |
Length | 38 |
Molecular weight | 4466.571 |
Aromaticity | 0.189189189189 |
Instability index | 45.8783783784 |
Isoelectric point | 9.38494873047 |
Runs | 7 |
Runs residual | 0.009422266303 |
Runs probability | 0.0419915714034 |
Amino acid sequence | MKMIFVFPLSCFILLSNSRLLNNHCIFLKYLLFFIIL |
Secondary structure | LEEEEELLLHHHHHHHLHHHHHHHHHHHHHHHHHHHL |
PRMN | LLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLL |
PiMo | iiiiTTTTTTTTTTTTTTTTTTTTTTTTToooooooo |