NONHSAT098390
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT098390 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1591 nt |
Genomic location |
chr4+:138114910..138119521 |
Exon number |
2 |
Exons |
138114910..138115323,138118360..138119521 |
Genome context |
|
Sequence |
000001 AGAATGCTAA TCTTTGTCTC TCCATGATTC CCACATAGCC TGGGTCCTGG ATAGGATTTA GATTCCACAG ATACTCTCAC 000080
000081 AGTGCCATTT GGCTGTAGAA AAGAACTAAA TGTGAAGAAA AGCAGGATAT AAAACATTTA TTTGCTGGCA TGTATAGAAA 000160 000161 TATAACTGGT GTCATTCTGC TGTCAGCATG TCAGAAGATT TTAGACTTTC CTGCAGTGGT TATGAAAGCT TTAACCATGT 000240 000241 TACAGGGGCA GACTGATACT GGAGTTTGAA AGCTACTCTT GGAGACATGG GCTGCCTACT ATTTTGGCCT TCCAACAATT 000320 000321 TTATAAGAAA CTCAATAGAT AACGATAAAT ACCTTCAAGC TTAAAATCGC GATTATGATT TCTGCTGTGC GCAATGAAAC 000400 000401 TCTGAGTGAA ACAGTCCTCC AGGATTTTGA AGTCCTCTGC ATCCGGGCAG TGGAACAGAA GTGTGGAGAA GATTCATCAT 000480 000481 CTGCTTCTTA AATGCCCTAG TCAGAAAGGG GTACTCATCA TTTCTGTTCA TATTTTATAC GGCTACAAAT AGATGTGAGA 000560 000561 AGAGCAAGAA AACATAGTCC TGGCAAGGCA GTTGCCTTCT GATGACAACT CTGCACTCTG GAGGTAGACA AATTTTGGTC 000640 000641 AATAGCTGGC AGTTTTAGCC ATATTAGTCC AGTACTCACC TTCACAAATG AGGAAACTTA AGACTCGGCC ATTGTTGATC 000720 000721 TAACACATAC TTACTGTTTT TTATTGTGTT TTCTTGATCT AATGGTATTT TGAAACACAA TGGGTAGGAC TAAAATATGG 000800 000801 ACCATTTGAA AGGAGGAAAT GTTAGATTAT TATACTAGGC AAATAATGTT GCCAATATAT TTGCACAATT ATGGGACATA 000880 000881 GACTTTCATT TTCCTGTTTA AAATAAGTAT GTAGTATTAA AGAATTAACA TAAAATATGG CATTATTAAG AAGATCTATG 000960 000961 ATTTTGGTGC CTGGTCCTTA TTTAGGAGTT TAGCACCCTG GTTACATATA TCATAATAAT GAAAAAGCAT TATTCTGTTT 001040 001041 TATGCTGCCT GCAGAAAAAA AAAGGATGAA AAATAGATAC TGTCTGTGCA GTATGAGCCA CAGTATAAAT GTGCAGAATA 001120 001121 TGATCTAAGT GGAGGATAAT AAAAATTTTG AAAGCAGTAT TTGCAAAACT TGTTCCAAAC TTCCTCATTA ATCAGCACAA 001200 001201 ATATTTTTCT AAGTATACAT TGGAAGGCCT TTGCACTTAA CTCAATTATT GAAGTAGTAG GAAAATTATG CTCTACTGTG 001280 001281 TATAAAATAT TTCTAAGCTA TTCAAAGAAG ACACTACAAA GATATTTAAA GAAGATACTA TAATATAGAA AAACACTTCA 001360 001361 TGCAGATGTA TCAATTATTA GTATCTCATC ACTGTATGGC GTTCTTAACT AAGTTGAAAT TGTTTTCAAA TACTGGTTGA 001440 001441 ATAAGTGAAG AAGGAAAATT GTATTGTGTT AACAGAAATA TGTGTTCATT CACCCACCCA CTGAACACCT ATTTTGTGCC 001520 001521 AGACGTTGTT CTGGACACTA GGGATCCAGC AGGGAATAAA ATACATGAGT TTCCCAAAAA AAAAAAAAAA A |
Predicted Small Protein
Name | NONHSAT098390_smProtein_149:268 |
Length | 40 |
Molecular weight | 4241.069 |
Aromaticity | 0.0512820512821 |
Instability index | 51.0384615385 |
Isoelectric point | 7.93365478516 |
Runs | 8 |
Runs residual | 0.0363876319759 |
Runs probability | 0.0343358063946 |
Amino acid sequence | MYRNITGVILLSACQKILDFPAVVMKALTMLQGQTDTGV |
Secondary structure | LEELEEHHHHHHHHHHHHLLHHHHHHHHHHHHLLLLLLL |
PRMN | - |
PiMo | - |