NONHSAT098514
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT098514 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1813 nt |
Genomic location |
chr4-:141782330..141785342 |
Exon number |
2 |
Exons |
141782330..141782401,141783599..141785342 |
Genome context |
|
Sequence |
000001 ACATGGAATG ATCAGAATCG TGGAGGCAAA GCTCTGTCCA AAAATGTTCA TTTTGTTTTG TTTTGTTTTG TTTTCTTGTT 000080
000081 TTTAACATTT CCTTCATCCT GGTGAAATAT CCTGGAAATT CATAGATCTG GGTTTGGTGA TTTCAAAACT CACCATGCCC 000160 000161 AGTGGCCATT TCAGTTACTG CCGTGACATC CCTGAGGCTA CCATACTCTC AAAACCAAAT CAATGCCAGT GATCTAACAG 000240 000241 GATTCTTTCT TATTTATGAG TTTTGTTTAG ATGGATATTT TTGCAGAGCA TAAAAAATTA AATGACATTT AGTTATCCAT 000320 000321 TGAATGTATC ACCCTGACTT AAAAAAAAAT CCTTAAATCA AAACTTTTCA AAAAATCTGG GCTATGGAGT CACTCCCTCT 000400 000401 GTGGAGCGAG AGCCCAGTCT TTTCTGGTAC TAAGGCCACA GAGGCAATTT CCAGTAGCAT TTTTATATCT TCTCTAAGTT 000480 000481 TCTTTTCCTT TTCTGTCTGT ATCTGTTTTT CTCTGACTGC CTATATCTTA CTTTGTATAC CCATACATAA ATTATTTTCC 000560 000561 CATCTTCTCT CTTCCCCTTT TTTTCTGATT TGTTTTCTCT CTTGCAAGAA ACTCTGAAAT AACCTTCAGA ACACAAAAAA 000640 000641 CTGGAGGTTC TATACCTACA GAGTCATTAT CATTATTGTG ATTACCATTG TTACTGTTGT TGGTGTTTTT CCTCTTTTTA 000720 000721 TTGTGTAGCA ATATCCATAT TCACTTCTGA TGAGGCAAAC CTGTTTACTA TAAACCAATG TCCTCCCTAA AGGAGTCAGT 000800 000801 TTCATTTTCA CTTCTCACAT CACCAGTTGT ATCGCAACCC ATCTTACAAC CATTGCCATG TTTTCAGGCT TCCTTGCCAT 000880 000881 AAATGTTTTC TGGGCAAATA ATGGCAAAGC AACAATTCCA GAATGCTGTC TAGATCTGCT TTCTCCCACC CTCAGCATTT 000960 000961 GACCCTCCTC ATTCGCCTGA GCCCCCAGGG TTAGGATTTC TTGGAAAAAC TTGTATACTG TACCTGATGG AATGCCCATT 001040 001041 CTTCCTAACT ACTTAGCACA AGTGCTTGCT CATCGTAAGT GATCTGAGGG CCACTAATTC CTGAAGACTG ACAAAGAGAC 001120 001121 ACGAAGAGAC TACCCTCTTA AGATGGGGAT GCATGGTTCT TCATGCAGTG CTCTTGGCCA CCGAGATCCT TCATCCATGC 001200 001201 CATTGCATGG ATGAATACGT TTGATGTTGG CAGTTAAAAT GGGATGGGAG TGTCACCCTG CAGGAAGTAA GAAAAGAGGA 001280 001281 TGGCAGGATC TCTGATCAGG GAGCTGGTCA AAGCAGGGCT GGAAAGCTTC TGTGCTTAAC AAAATGTGCA TGCTGTCCCC 001360 001361 AAGTAAATGC TCATCCCTAG GTTTAGAGCT GACCTGGGTT TTGGGGAGTT TGTATTTTTA AGGAATTAAA TACTCATGAG 001440 001441 TTAAAATACT CATGATTGCA AAGAAGGTCT GGATTGCCTG AAAAACAAAT TAATTCTAAG AAGCTAATAT GAGTTTCTCA 001520 001521 TCATCCCTTA GCTCTTCCTT TTCCCTCCTT TTGTCCTCAC TCAACCCCAG ACCCTGTGTA ATAGGAACAT TAATTTTTAA 001600 001601 AGACCCACAG ATCAATAGCC ACACTCTTCC ACTCTACACC TTTTATTGAC ACCAAGTTAT CATCCCAGAA CTAATGAAGC 001680 001681 AAGTCCAGAT GCTAGACGTG GCCCCTTAAT ATTGAGCAAT TTGATTGCAA TCCTGCTTGT TTTTGTAAGT TATCTCAACT 001760 001761 TTATTCTTGT GAAATTGCAA AGGAAGATCA ATAAAAAGAC TTCATATGAA TGT |
Predicted Small Protein
Name | NONHSAT098514_smProtein_383:616 |
Length | 78 |
Molecular weight | 8564.1423 |
Aromaticity | 0.155844155844 |
Instability index | 59.6038961039 |
Isoelectric point | 7.64031982422 |
Runs | 10 |
Runs residual | 0.00621118012422 |
Runs probability | 0.0218071012189 |
Amino acid sequence | MESLPLWSESPVFSGTKATEAISSSIFISSLSFFSFSVCICFSLTAYILLCIPIHKLFSH LLSSPFFLICFLSCKKL |
Secondary structure | LLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHLLLEEEHHHHHHHHHHHHLHHHHHHHH HHLLLLEEEEEEEELLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLHHHHHHHH HHHHHHHHHHHLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTTTTTTooooTTTTTTTT TTTTTTTTTTTiiiiii |