NONHSAT098714
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT098714 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2532 nt |
Genomic location |
chr4+:150075447..150199280 |
Exon number |
13 |
Exons |
150075447..150075771,150076604..150076877,150123515..150123708,150125045..150125304,150126059..150126366,150135596..150135683,150135803..150136039,150137555..150137729,150139117..150139172,150177156..150177247,150177385..150177550,150181129..150181214,150199017..150199280 |
Genome context |
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Sequence |
000001 AGTATCCTTC TTCCACCAGG AGGAAGAAGA ACTGTGTCTC TGAAGTTTGG GAAGTATACG TAGACATGGA GTCTGGCCTT 000080
000081 GAGCTTTCTG TAGTAGAAAG GCCCATGTCA GCAGCCCTTA AAGGGACAGG GTGAGGTGTA CTCGGGGGAA AGATGGTAGT 000160 000161 AACCATACTC CTCCCAATTT TCCGTGATAC ACCACAGTGT AAAAGAGGAC CCCAGTGGTT TCCACGGCTA CACAGAAAAT 000240 000241 TCATGGAGGG TAGCAGAAGA AGATGAGCCA TGGAGCTGCC AGGTGGCTGC CAGTCCAATC TTTTAAGGTT CAATTTAGGG 000320 000321 AAAAGGACTT TTTCTCAGTA AGCCCTGATA CCTTGATGTG AGAAGGCCAA GAAGAAGCCT ATAGAGATGC CCACAAGAGG 000400 000401 AGACTAAAGC TGAGAGAAAC TGAGGCCCCT GGCCCTAGAG CTTTCACTGA GCTCCAGCTG ACAACCATCA TCAAATCACC 000480 000481 AGTCATGTGA CTGTGCCATG ATGGGAGGGA ATCACCCAGT GTCCAAATGA TCTGATGCCA CATGTAAAAG AGAAGAGCCT 000560 000561 TCCCCTTTGA GCCCTGCCCA GATTGCTACT CTGCACCAAG TTTGTTCTTT ACTCCCAGCC TAATGGATGA AATGAAACTT 000640 000641 GGTGAGCTCC CAGAGTTGGA CAACCTTCAG AATGCTGAGA CATACTAAAT GAAGGAAGAA AGTCCTTTTG TGAGTTCTCC 000720 000721 AAAACTCAGA CCTCCCAGTG ACTACAGCAA GGTCCTGTTG TTTCAGTGAA AAGCTGTTCA ACTTGGTGAA CCAGACAGAG 000800 000801 AAGAGACCCT GGGCCGTAAG AGGCTTTAAA AAATATTTAT CCAATGAATG AGGAGTGATG GAAGTGAAGA ACACTAAACT 000880 000881 CAATTTAGTG GTTACCACTG CATAAAGGAG AGAAATAAAA CTGCAAGAGG AACACGAGGC ACCACCTGTA TCTGCAATAT 000960 000961 TGTGTCACCA TAAGAAAACT CTGATATAAA ACATGCCAAA ATACTGAGCT CTGGCAAAAA ACAAAAAGCA AACAAATTCA 001040 001041 GCCACAGCTA AAGGCTCTGC ATGAATTCTG TGGTCTCTAT AGGAAGTAGT AAAATGATCT ATGGTACCCC AAAAGCAGTC 001120 001121 TTCAGGGGAT TTCACAGAGC AAGTATCAGA ACATGTTACA ACTCATTTCT AAGGAAGTTC CTCTAAACTT CCTGTCTGTA 001200 001201 CCATAAACCA TGGTCTGCTG GTCTCCTCTT CATTCATTCA TTCATTCATC CAAGATACTT TCTGGATGTC CCTGTCTTCA 001280 001281 GGAAGAAGGG CTTAATAGTG GAATGTTATG TGGGCATTGC CACTGGACAG AAACATTCTT CTCTTTGCAT AAAGTCACAT 001360 001361 GAGTCTAAGA TAATAATCTG GCCTTGTTCC TCTACAGAAT GACCTCATTG TTGGCTCATG AAAGAAATGA AATAATACTA 001440 001441 ATAATTCATG CTCTTTTAAT TTCCTACCAC AAAATAAAAT TACAAAAGCA AAATAAAATA GAATAAATAA AAATTTTAAA 001520 001521 AGATTACACA CGAGAAGTAC TTCAAAATGG ATTATTAACT CAGAACATTC CACAAACTAT TATATACTTC TAAAATAAAA 001600 001601 GCAAATTTTT AAAAAGTCTA TATCACAGTT TAAAACATAG AGAACTACTT CTTTTATCTA ATCAAAGAAC TTATAATGAC 001680 001681 TATCAGAACA GGGTCTTAAG AAAATGGCAG CTTTTATTCT CGTTCAATGG AATACAGGAG CCATTCTGTG AGGAAGCCCA 001760 001761 AACTGGGTTG TGGAGAGGTT TATCTGGAGA AGAATCAACA GACAACACTA ATTTGCCAGC CATTTGAGGA GCAGTATTGA 001840 001841 AAGTGGATCC TCCATCTCTA GGTCTTCAGT TTCAGAGGAG CTGTGACTGA GGAACCACAT TTGCACCTGG ACCTGAGTAC 001920 001921 TGTGTGTACA TTTACTGAGA AGACAGAGGA TTTCCAAGCA ATACAAGAAT TCTGTCACAT AAACGATCTG ATGGGAAACA 002000 002001 TATCAAAGTT GCTGGATTGC TGGTTCTGTA TGCGTGCTGG GAAACAATCA CACTCTAACT GTAGCTGCCT AGGTCTTCTG 002080 002081 ATGCCATGTT ACAGATGGCC TGTGACCTGG GAGCACCCAA AGCAACATGC TGAGACTGAA TACAACTCCC TTTACTTCAC 002160 002161 AGTTCTCATT TCCAGAGATA TTTGCAAGGA AAGGGGACAT CTGCAATGTT TGACATAACA TCTTGTCAGA CATGTGGCTG 002240 002241 CTTCTGCATT TCTAGAAAAA GCAATATGAA TGGAGGCTGG CCAGAAGTCA AGGGAAGACA AAGGATCCAG CTGGCTTCAG 002320 002321 CAGCTCCTGT AATGCAGCAC AAGTCACAGT GTGGAAAATG CAGAGAAATG GTAAATTACT GTAGAAAGAC AGACTGCCAG 002400 002401 GCTACCTTGA TTGCCACTGC ACTGGGATTA CATACAAACT TTATTGCACA GGTCATATCG ATAATTTACT AAATTGAAAT 002480 002481 TTGAGCAACA AAAGATTAAA AACCACTTAA AAAATAGAAA AAAAAAAAAA AA |
Predicted Small Protein
Name | NONHSAT098714_smProtein_152:265 |
Length | 38 |
Molecular weight | 4554.4236 |
Aromaticity | 0.108108108108 |
Instability index | 68.0081081081 |
Isoelectric point | 11.8818969727 |
Runs | 5 |
Runs residual | 0.0446317877511 |
Runs probability | 0.0376081964317 |
Amino acid sequence | MVVTILLPIFRDTPQCKRGPQWFPRLHRKFMEGSRRR |
Secondary structure | LEEEEEELLLLLLLLLLLLLLLLHHHHHHHHLLLLLL |
PRMN | - |
PiMo | - |