NONHSAT098776
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT098776 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1114 nt |
Genomic location |
chr4+:152834005..152865085 |
Exon number |
5 |
Exons |
152834005..152834139,152840619..152840684,152842915..152843026,152860930..152861551,152864907..152865085 |
Genome context |
|
Sequence |
000001 GGCTTTTCTA CCCTTGGAGA GGCACTCAAA GAAAGCTCAC AGCAGGTGAG CAGAAGGCAG GAGATACGAA AGGAAGCCAG 000080
000081 GCGGTGGGGT AATCAGGAGG TCATGTTGTG GAGCCAGAGG TCAGAGCACT TTGAGCCAGG CCTGCTCTAA CAATGTGACG 000160 000161 TGATGTGTCC TTCTAGACAA GGCCAATATT AATGATGACA TGATCTGCAC AGGAAGCACA AAGCTCTGGT TACCACTGGA 000240 000241 agccgtcttg cccccataaa ccagccttag gatgccactg atgctgtatg gcagaatgga gtaacagaga gaaGTTTGCA 000320 000321 GAATAAAGAA GGGACAATGC AGTCACCAGG TCAGCATTAA GGGAAGGCTT GGCTGCATCA TCTGCCACTC TGCTGCTGCT 000400 000401 GACTCTGCCA GTGGGGACAG CACATGCTTC CTTCTACGCT TGCCTGAGGT TCGTAACTTC AGAGCCCCAC AGCATTTCTG 000480 000481 GAAGGAGTAA AATGAGCTAC ATGGTCCGGG AAGCTACTCC TAAGTAGAGT TCACAATCAA AGGAATAGAA GCTGGGGAAA 000560 000561 ACAATAAAGC AGTCTTCTTC TTCTCAAGTC ATCTGTGACA GGtttttttt atttttaatt tttattaGAA TAGGGAGACA 000640 000641 TAGAACCACC AAACTCCTAT AGAAAACGAG TCTTCTGAGC ACCAGTAGCC TCATTATAGA CCAACTGTAT TAAAACCTGC 000720 000721 ATCAGAACCT AGATGACCAT TTGCTGTTCT CCCCCCCAGG ACAAATCCAC acagttgtat gggttgaaca ctgaacaact 000800 000801 taagaagcac taccatgtac attatagata tagatataga taaagataca gatatagatt atggatatag aaaacttgtg 000880 000881 tatttgttcc aacaaattcc cggcagatat catcaaagtg tcttgatgta ggggtGCAGA GTTAGCCAGG CCCTCTGTCT 000960 000961 TGCATGAGAT TGAGTGTGAT TCTGGGGATG CAAATCAGGA TGTCTCTGGG AAGAATTGCA TTGTGTAGGT TATTTCAATT 001040 001041 TAAGAAGTAG CTGCAAGAAG ATTCCAAACA CATTTTGCCT CAAGTCACCT CAAGTTTCTA ATCTTCCTGC TGGA |
Predicted Small Protein
Name | NONHSAT098776_smProtein_860:925 |
Length | 22 |
Molecular weight | 2353.7762 |
Aromaticity | 0.047619047619 |
Instability index | 47.9380952381 |
Isoelectric point | 4.55657958984 |
Runs | 6 |
Runs residual | 0.0394557823129 |
Runs probability | 0.0183124300771 |
Amino acid sequence | MDIENLCICSNKFPADIIKVS |
Secondary structure | LLLLLLEELLLLLLHHHEELL |
PRMN | - |
PiMo | - |