NONHSAT098788
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT098788 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
640 nt |
Genomic location |
chr4-:153097979..153101461 |
Exon number |
3 |
Exons |
153097979..153098002,153099640..153099862,153101069..153101461 |
Genome context |
|
Sequence |
000001 TCCTGGCCAA GGTCCTTTGC TGACAGAGAA GGAAACTCAC CAAAACTAGT TTGAGGAAAG AGAGAAATTA AATGGCGGGG 000080
000081 CAGAGGTGAT TTCATAGTCT CTGTGAGCAA AAGCATAGGC AGGCCTCATG GGACCCTGGA AAAAGAACAG AAATACCTGC 000160 000161 AAATGAAGTT CCACTCTCAT TCTCTTACCG GGGGCCATTC CTGCATTGCA CCCGCAGATG TTGCTGCTAC TCTGCAAGAA 000240 000241 ATTTGTGGGG TTCTAACCTC TGCCTCACCA TGTGTCTGCT TCAGTTTCTT CTTTCTGCCA AGGTGGAAAG TGGCCATCCC 000320 000321 AACTGTACCT TTGCAGGACC CAACGCTGAC CATTGAGAGA CTCTGGGTCA ACTCCAAGCT GGAATGAGAA AGACTGTCAG 000400 000401 CAAGTTCAAT GGAGAGAATT CCGAGCCGGG TGGGGAGTGG GGGCAAGACA GCAGAGACAC AGGGAGCAGG TGGGCCTCTC 000480 000481 AGAGCTCTGT AAGTCACCCC ATAAAGGCAG CCGCTTCCTC TGCCTGTAAC AGTGGCAGGT CTTGCCCGAA GGTGTATTTC 000560 000561 AGGAAGACGG GGGATGAGCT GAACTATGCC TTCTCCAGAG CAGGCTAGAC ATGTGGccta ggtgacagag agagagcaag 000640 |
Predicted Small Protein
Name | NONHSAT098788_smProtein_383:607 |
Length | 75 |
Molecular weight | 7989.6128 |
Aromaticity | 0.0945945945946 |
Instability index | 54.7418918919 |
Isoelectric point | 9.44232177734 |
Runs | 11 |
Runs residual | 0.00599868160844 |
Runs probability | 0.0459282812224 |
Amino acid sequence | MRKTVSKFNGENSEPGGEWGQDSRDTGSRWASQSSVSHPIKAAASSACNSGRSCPKVYFR KTGDELNYAFSRAG |
Secondary structure | LLEEEELLLLLLLLLLLLLLLLLLLLLLEEEELLLLLLHHHHHHHHLLLLLLLLLLEEEE ELLLHHHHHHHLLL |
PRMN | - |
PiMo | - |