NONHSAT098847
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT098847 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
558 nt |
Genomic location |
chr4-:154669688..154681176 |
Exon number |
3 |
Exons |
154669688..154669979,154672590..154672627,154680949..154681176 |
Genome context |
|
Sequence |
000001 ATCTCCCGCC CCGCACAACC CGGGCAGGGC CGCCGCTCCG CCGCCGCCGC AGATCCGGCT CTCACCCTCG GCTCCCGAGG 000080
000081 CCCCGCGGCG CCTCCTTCTG CGGACTCTGC GGGACCCTCC CCGGCAGGCG CTGTGCCCTG GAGAAGGCAC AGTGGCTCAG 000160 000161 GCATGGCCGC GGGGACGGCG GCGCGGAAGG CAGCGCCGGT GCTGGAGGCC CCCCCGCAGC AGGAGCAGCT CTCTCATACA 000240 000241 AAGCTTTCTG CAGAAGACAC ATGGAAGTTG AGGGCTTTTT CAGATGACCT CATTTTGCTG GTTCCAGCCT GCAGCAGGAG 000320 000321 AGGATGTACA AGATGCACCG GGGCCACGAT TCCATGCACG TGGAAATGAT CTTGATCTTC CTCTGCGTTC TGGTCATTGC 000400 000401 CCAGATAGTG CTGGTTCAGT GGAGACAGAG GCATGGCCGA TCCTACAATG TGAGTCATCC CCGTGGCTGC TGGGAGCCTG 000480 000481 CTCCAGCTTG TATCAGCTTG ACTGTTTTTT TCCAGGACAT GTTCTCCCTT GGTTAGCACT TTGAAGGAAC TGCCTTGG |
Predicted Small Protein
Name | NONHSAT098847_smProtein_323:535 |
Length | 71 |
Molecular weight | 8188.6304 |
Aromaticity | 0.114285714286 |
Instability index | 67.2771428571 |
Isoelectric point | 8.63677978516 |
Runs | 8 |
Runs residual | 0.0305516265912 |
Runs probability | 0.0346338986044 |
Amino acid sequence | MYKMHRGHDSMHVEMILIFLCVLVIAQIVLVQWRQRHGRSYNVSHPRGCWEPAPACISLT VFFQDMFSLG |
Secondary structure | LLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHHHLLLEELLLLLLLLLLLLLLEEEEE EEEHHHHLLL |
PRMN | LLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLL LLLLLLLLLL |
PiMo | iiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTToooooooooooooooooooooooooooo oooooooooo |