NONHSAT098883
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT098883 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
493 nt |
Genomic location |
chr4+:155666599..155670332 |
Exon number |
3 |
Exons |
155666599..155666694,155669341..155669540,155670136..155670332 |
Genome context |
|
Sequence |
000001 GGCAATGCAG GACCGCTTCC AGAGATTCCA GAGCTGCCCA GTATTGCTGC AGAAGTCATC AGGTGTCCAC CCACAGTGTA 000080
000081 GTTCAAACGA CAAAGGcacg tagaagaata cagaggactt gtgcatcaaa catctcagtt aatcctcaga acaaTTTGAG 000160 000161 TGTTCCCATT tgactacttg aggtgacata gccaataaga gctggagcca ggactcagac ataggccatc atttctaagt 000240 000241 aaaattattt ttctaAGGAA AACATTACAC ATATTAGAAG GATGCATTCC TCAGGGTTTT GTGAGACTGT GAAGATAATT 000320 000321 ATTCGTGATC AGAGAAGTGT TCTTGCTTCA GCAGTCTTGG GATTGGCGTC TATAGTCTGT ACGGGCTTGG TATCATACAC 000400 000401 TACCCTTCCT GCAATTTTTA TTCCATTCTT CCTATGGATG GCTGGCTAAC TTCATACCCC CATGTCAGTG TGTGTATTCT 000480 000481 GTATGTAAAT ATG |
Predicted Small Protein
Name | NONHSAT098883_smProtein_281:448 |
Length | 56 |
Molecular weight | 5933.0357 |
Aromaticity | 0.109090909091 |
Instability index | 51.7890909091 |
Isoelectric point | 7.83538818359 |
Runs | 11 |
Runs residual | 0.0484848484848 |
Runs probability | 0.0398821281175 |
Amino acid sequence | MHSSGFCETVKIIIRDQRSVLASAVLGLASIVCTGLVSYTTLPAIFIPFFLWMAG |
Secondary structure | LLLLLLHHHHHEELLLLHHHHHHHHHHHHHEEELLLEELLLLLHHHHHHHHHHLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTToooooooooo |