NONHSAT098990
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT098990 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1352 nt |
Genomic location |
chr4-:159120248..159123554 |
Exon number |
3 |
Exons |
159120248..159120502,159121476..159121610,159122593..159123554 |
Genome context |
|
Sequence |
000001 ccctgcacca acttagctta catctgagaa agggaaacca gaaaatagat gacaaatatg gtatatgaaa tagtgatatg 000080
000081 tgctaaggaa aaaaaaatta aggagctagg aagactagag actctgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg 000160 000161 taggttgggg gtactgcagt ttaggaaagg aagtcctcac tgagagggag acatttcagt gaaggcctgg aggagggagt 000240 000241 gggagtgggg agagagtgtc cagtacagag gccctgaggc agatttgaga aagggcaaag aagtcactgt agctgtggtt 000320 000321 gaggtggaaa gaaggagagt ggtagaaaat ggagttagag aggtaatggg ggtgggaaga atgtgagggg cctcacaggc 000400 000401 cttatggact ttggatattt ctctgagaga aatggggaac ctctgaagtg ttttgatcac aggagAtgta ttagtcatct 000480 000481 gttacagggt aataaataca gccaaccaaa atgtagtggg ttaaaagaac actaagtacg tattatctct catagtgtct 000560 000561 gtggatcaat aatttgggag cagctcaagc aggtcttcct actcagggtt tctcatcagg ttgcagtcag acctgggcta 000640 000641 gggctctggc cacctgaaga ggtggttaag tcgagaggat tcacgtccca ggtggtttac tcacgtgact gacaaattgg 000720 000721 ctgtagctga tggtgggaga tctcaggcct tcttgacatg ggcctcacca caggactgct tgtctcatgg aatgtcactg 000800 000801 cccttccaca gagtgagaaa tccaagaagg tggctgtgtc cttgtcctct atgacttcac atctgaagtc acacatcatg 000880 000881 ccttctgcag tgttctatga gtcatatggt tcatcctgat ttaggctgta agcagattgc atcatggcgc ggataccagg 000960 000961 agaggaacat ctgaggctgc gcaatctcta aggaaaagag gtttatttgg ctcactgctc tgtgggctgt acaagaagca 001040 001041 tggcaccagc atctgctcct ggtgagaggc tcaggctgct tccactcatg gcagaagCTT GCTCTGGCTA ACAACCACTA 001120 001121 TCATCAAAGT TGTCTGAGGA AGACCTCCTG TTGCTGTGAC TGACGGGACT CTTGGTGGAA GCCCTATTCC CATGTGCCCA 001200 001201 TGGCTGCAGC TCCCCAAGGA AGCAGGACAT TGTTGGATTC TCTAAGAAGC TCAGAGGAAG TTACTTCTCA CTGTGGTGCC 001280 001281 ATATGGGATT TGAAGTCGTT CTACTCATGC TCTGTTTTTC AATAAAGCTG CTTCTGCCTC TGTCTTCTGT GC |
Predicted Small Protein
Name | NONHSAT098990_smProtein_1199:1324 |
Length | 42 |
Molecular weight | 4479.9776 |
Aromaticity | 0.0975609756098 |
Instability index | 74.0075609756 |
Isoelectric point | 5.46429443359 |
Runs | 6 |
Runs residual | 0.0296274128385 |
Runs probability | 0.0480922098569 |
Amino acid sequence | MAAAPQGSRTLLDSLRSSEEVTSHCGAIWDLKSFYSCSVFQ |
Secondary structure | LLLLLLLLLHHHHHLLLHHHHHHHHHHHHHHHHHHHEELLL |
PRMN | - |
PiMo | - |