NONHSAT099151
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT099151 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1409 nt |
Genomic location |
chr4+:169936687..169938095 |
Exon number |
1 |
Exons |
169936687..169938095 |
Genome context |
|
Sequence |
000001 AGATCTGTAT CAGAGGCACG GGCCTGGCAG CCTTCACTGC ACTTGGGCTC TGAAAGACGT TCTCACTCTT GCAAGTCACC 000080
000081 TGGGAAAGCC AGAATCGATA CTGTATGGTT TAACATTTGA AACTGACTTG CAGGTAATGG CTTCTGCATT TCCAGAAGGC 000160 000161 ACCCGTGTGC CTGTAGGGAT CTCATTTTAA GGATCACTGC TTTTTGTTTC TCATCTACAG GCTACAGAGA CCCATCTCTC 000240 000241 AGTTTGGATT TTGATTAAAC AGTTATGCAG AGTAGAAAAC TTGGGCCATA CACAAAACTT AATTAAAATA AGCCTCCACT 000320 000321 TGGGATTAAT GTAtgttatt gactgaatcg tgtccctccc cgctcccccc tctcctgcca tattcatatg ttcaagtcct 000400 000401 aacctccaat gtggctgtat ttggagatag tgcccttagg gagataatta agattaaatg aggttctaag ggtagggctc 000480 000481 taatccaata ggacaccaga gagcttgtgc tgggaatctc tctctctctc tctctctctc tctctctctc tctctctctc 000560 000561 tctctgtctc tctctctctc tgttgcctcc ctgtacaagg ccatgtgagg acacagtgag aaggcagcta tctgcaagcc 000640 000641 cggaagagaa gcctcaccag aaaccaacac gattgcacct tgatctcaga ctttcaggct ccagaactgt gagaaaatta 000720 000721 atttctggtg tcgaaaccac ccagtctgtg gtattttttt atggcagtcc cagcaGATAC AATGTGACTG TTTACTTTCT 000800 000801 TCTCTACTAC AGGCAAGCTG CAAAGTGCTG CTAAGTAATA TCACACAGCC ACTGCTGATT GTGTGAGTTG AGTTGGGGAG 000880 000881 AGGTTGTTAC TATGAGACCT ATTCCAGAGC AGAAACAGGA AGATTGTGAA TCTCATCCTC GTCACTTGCC CATGGCCTGC 000960 000961 AGCATCCAGA CCCCTCGAGG TCCTCTCCTA TCTTCTTGCC AAAGCTTACT TTCAGGGAGG ACTTGGAAAT TCATTCCCTC 001040 001041 TAGGTGGTAA ATAATGTAAC AGCATAAAGT GTTATGTCAC CTAGGGACAT GTAAATTGAG CCGAGAGCCA AGTGTTAAGC 001120 001121 TAAAGGGATG ACAATCTAAC AGGGAAATAT CATCTAGCAT CTACCTGTCC AACAATATGA ATCTACTGCG AGCTCAGGAA 001200 001201 CATCCCCAGt atcagatgta aagctctggg gataagaggg caaagaaggc aattacctga attgtggagc tcacatgtgt 001280 001281 tgagagaaac agacaaataa gcagattacg atacagtgtg ataaaggctg taaatgtgaa tgaagtgcta taggaacata 001360 001361 gagcttcagg ctcaggccaa ataggcaggg gggcatgtgt gtgtgtaga |
Predicted Small Protein
Name | NONHSAT099151_smProtein_332:460 |
Length | 43 |
Molecular weight | 4604.4293 |
Aromaticity | 0.0714285714286 |
Instability index | 65.9833333333 |
Isoelectric point | 5.93463134766 |
Runs | 7 |
Runs residual | 0.00949367088608 |
Runs probability | 0.0203018144195 |
Amino acid sequence | MLLTESCPSPLPPLLPYSYVQVLTSNVAVFGDSALREIIKIK |
Secondary structure | LLLLLLLLLLLLLLLLLLEEEEEELLEEEELLHHHHHHHHLL |
PRMN | - |
PiMo | - |