NONHSAT099378
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT099378 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
1129 nt |
Genomic location |
chr4-:178264263..178298542 |
Exon number |
5 |
Exons |
178264263..178264872,178278149..178278324,178281693..178281802,178282404..178282526,178298433..178298542 |
Genome context |
|
Sequence |
000001 CTCTGATTTC TGCTTTCATT TTCTGAAAGT CTTGAATATC AGACGATCAG TTTTATGAAA AGAATGTACA AAGAGCAAAT 000080
000081 CAGCAGAATC TGATCCTCAT CTTTAAGACG ttctattcca gatgaagagt aactagaaaa aatatgtatc tctgaacatt 000160 000161 agaatcacac tcagcctgat gagatgctca caccgaggaa taccggaagt gagactgact aaacggacct gagGTAGAGG 000240 000241 ACAGGCATAA AACTGCCTGC CCTTGTTTTC CCCATCCTTC CCCACAACTC GGAGAATGCA GAGGCGGTTG TGTTTACTGC 000320 000321 AGCGAGGGCT GTCAGGATTT AAGGATTATT TCGAGGATTA AAACAAACAA AAGTGAAATG ACTCATTCTG GACGGCCCCA 000400 000401 GGTGGTTCTG AAATCCTGAG ACTGAAAACT CCAAGAAGCA ACCAAGAGAC AAGGACATGG TGTCAGTACT TGCACTGGTG 000480 000481 ATTAAAGACA GATCTTCAAC ATCCCTGACG GCAGCAAATA TGTCTATGAT AGTAACACGG GGTGAAGCGG CTGAGTGGAA 000560 000561 GAAGATATAG AGTGCTGTAG AGAAAAGTAT TGGAGAACAA GAAGAGTGAT GCAGAAAATG AAACGCAGGG ACACAAAGAA 000640 000641 AAAGCACGCA GTTCTGGACA TATTTATGAA GACTTAAGCT GGGACTTCCT CTGCACACCA GCTCCCTCCC CTGCCCCCAG 000720 000721 CTCTACAGAC ATGACCGCAC TTCCCACCTC CCGGGTTTCC CACAGCCGAG TGGTGCCCTG AGTCTCTTCC TATGTCCAAT 000800 000801 CCTATGGTTT TGTTTCCTTT GCTTTTTCTT TCCTGCCCAC TTTGTAGTTA TAGGTATTTG CTGAAGCTCA GACCTTGGCT 000880 000881 CATTTCCTTT CTCATTCTTA CTGAACTGAG AAGTTGGAAT GCTTCAATCA ACAGCACTGT GCCGACAGCC TCTCTCATCC 000960 000961 TGGATCGCAG CCCCTAAGAC ATGTCTTCCT GGATATTCCA GGGTTCTTTC ACATATCTAA CACATACTGC ATCTTCACTG 001040 001041 CTGCATCCCA ATTTTCCCAG ACCCACAATG TGAAAATTTT TATTATTTGG TCCTGAAACC TTTTGCATCA TCCTACCTAT 001120 001121 CAAATCTGC |
Predicted Small Protein
Name | NONHSAT099378_smProtein_791:976 |
Length | 62 |
Molecular weight | 7013.3582 |
Aromaticity | 0.114754098361 |
Instability index | 66.2475409836 |
Isoelectric point | 9.38128662109 |
Runs | 9 |
Runs residual | 0.00527605049934 |
Runs probability | 0.0647804667412 |
Amino acid sequence | MSNPMVLFPLLFLSCPLCSYRYLLKLRPWLISFLILTELRSWNASINSTVPTASLILDRS P |
Secondary structure | LLLLLLLLHHHHLLLLLLLHHHHHHHLHHHHHHHHHHHHHHHHLLLLLLLLLLLEEELLL L |
PRMN | LLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLL L |
PiMo | oooooooooooooooTTTTTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiiii i |