NONHSAT099470
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT099470 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1423 nt |
Genomic location |
chr4-:184245123..184254636 |
Exon number |
3 |
Exons |
184245123..184245165,184252550..184252984,184253692..184254636 |
Genome context |
|
Sequence |
000001 CCAGCCTGGG AATCTGCTGT GGCCTCTGGG CCTCGCACAT GCTGTTCCTT ACCCCTGTGT TGTCCGTTCC CTCCTCTCTG 000080
000081 CGTGGCATTA AATTCTGATG GCTCCCATCA TGCTTTGCAT GGACATGAAA AATTACCAAC TTTGGGAAGC CTCCCTGGTG 000160 000161 GTGCCGCACA GGCTACGTGT CCTAGCCAAG TGCTCAGTAT CTTCTCCCAC TCCCTCCTCC CTCACCTCAC GCTTGTCACA 000240 000241 CGGTATTGCA GTTGCCTCTT TCCTCGTCTG CCTTCTTGAA CGTTCTGTGA GTTACTTGAC AGAGAGGACC CCTCTTCTCC 000320 000321 ATCCCTGATC CCCTGTGTGT GATGTGCTTA TTACAGGAAT TCAACACAAG GATACGTAAT GCAGGAAGAa tagatggatg 000400 000401 gacagatgga tggatggacg gatggatgga tgggtggaca gatgagcaga tggatggatg gatggatgga cggacggatg 000480 000481 gatgagcaga tggatggatg ggaggacaga tggatagatg aataggtgga tggatggatg gatgatggat ggatgAAAAG 000560 000561 ATTCAGATAC AGGTGCAAAG TATTTCACAT ATACAATCTC TTTATTCAGT GTTTCTCCTC TTAGAAATTA TATTTTTCTT 000640 000641 CCAGCGAAGG TTGGTGGGAA TCTTTGTGCT GATAATACCC ACAGCTCTTC TCCCATAGCA GGATTTGAGG GAAACTTGGC 000720 000721 AAGAAACACT GCCTCTGAAT CCAGCCTCCC TGCCGCAGCC CCAGGTCGAG CAGGTGGACC GGAACCACGG TCACTGACCA 000800 000801 GGGTATCTGA TCCTCTCAGT CTGAAGGAAA GTGAGAACTC AGCACAAACG CCATGGACGG TACAGTGTGG GAGGGAGCAG 000880 000881 CCTAGAGAGA GAAGCACGAA GCACTCGCTC ATGTCGGAGG AGGAGGAAGA GCGATCCATG GGCAGGGGAA TTTGAGAGAG 000960 000961 AGACCTCCTT CAGACCCGGT TAGCGCACTG TTTTCAAAAA ACCTGAATGG AACAACCTGT TGAGAGAGCA AAGAGCGCTT 001040 001041 GTGTTTGTGG CACACGGGAG CCTGGCGGCC GCAGGTGCAT GTCAACAGGA GACCCACGGC AGGCCTCCCC TCCACGGCCC 001120 001121 CTCCCACACC CCAGACTTAG ACATGCTGGT ACTGGACATC CTGAGCTGCT TCAAGTTGGA ACGTCACATC CTCCAGAGTT 001200 001201 CCAGGCGGCA CTAAAGTCTC TGGGACATGG TCAGCTGTTT AGATGGGTTC CCAGGAAGGC TCACTGTTCT GGAAAGGTCT 001280 001281 GTAAGCCTGT GACCTGAGCT CCTTGAGGTT CAGGGGGCAG GTCTGACTGA AGCAGAGTTT TCCCTTCCCC GGCTCAGGAG 001360 001361 GGATTTCCCA CTTCTCCCTG GCCTTCACCA CCCCGACTGC CTCCTGGAAG AGAGCTCAAG CTT |
Predicted Small Protein
Name | NONHSAT099470_smProtein_548:697 |
Length | 50 |
Molecular weight | 5731.8738 |
Aromaticity | 0.122448979592 |
Instability index | 48.9244897959 |
Isoelectric point | 6.51519775391 |
Runs | 7 |
Runs residual | 0.019194704909 |
Runs probability | 0.0434552199259 |
Amino acid sequence | MDEKIQIQVQSISHIQSLYSVFLLLEIIFFFQRRLVGIFVLIIPTALLP |
Secondary structure | LLLLEEEEELLHHHHHHHHHHHHHHHHHHHHHHHHHLLEEEEELLLLLL |
PRMN | LLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTTTTTTooooooo |