NONHSAT099566
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT099566 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
3390 nt |
Genomic location |
chr4-:185764450..185768200 |
Exon number |
2 |
Exons |
185764450..185767688,185768050..185768200 |
Genome context |
|
Sequence |
000001 ATGTGGGTAG TCTGAGGCCC ACGGTGTCAG AAGCCCTGGT TATTCAGGCT CCTGAATGGT GACTGGTTTG TCCCCTCCTG 000080
000081 CTGGAGTCAT GTGTCCTCTG AACTGGCCAT GGAGCAGAAG AGGTTGCATG GCCAGAAGGA AAGGAAAACT GCTCCTGTCT 000160 000161 CCCCATCCCC TAGAATCGTT GACAAAATGA GTGACACTGC CCTGGGATCT GGGTCTCTGG TTGAGGCCTT GGAGCTACTG 000240 000241 CCTCTGCCTG TGAACTCACC CATCATCGCT AACAGGTTGC TCCACAGCCT ACAGATCTCA ATATTTCGCT AGCACAAAAC 000320 000321 CCAAGCGGCC AGGCACGGTG GCTCACGCCT GTAATCCCAG CACTTTGGGA GGCCGAGGCG GGTGGATCAC TTGAGGTCAG 000400 000401 GAGTTCGAGA CCAGCCTGAC CAACATGGAG AAACCCCGTC TCTACTAAAA ATACAAAATT AGCCGGGCGT GGTGACACGT 000480 000481 GCCCGTAATC CCAGCTACTT GGGAGGCTGA GGCAGGAGAA TTGCTTGAAC ACCGGGGGTG GAGGTTGTGG TGAGCCGAGA 000560 000561 TTGCACCACT GCACTCCAGT CTGGGAGACA GAGAGAGACC CCATCTCAAA AGAAAAAAAA AAAAAAAGAC CAAGGGACTT 000640 000641 CCGGGAACTA AAACATCTCA GCCCTTTCAT CGCCAGTGTC TTCATCTTAC AAGCAGAAAA GGAAAAAAAG CAGTGGGAAG 000720 000721 CAGTAAGAAG CTACCGCTGA CTCACTATGA ATTACTGCTG ACTTTGAATT ATTTAGCAGC TGTGGAAAAG CCATCTTTTG 000800 000801 TTTAAAAAAA AAATAGGGTT TTCTGAAATG CTTTTTATTT TTTTATTTGT ATAAATACCT GCCCAGAACA GTCAAGTCAA 000880 000881 CTGACATCTG CTAAATGACT GAGACACTGT GGAATTTGTA TACTGGCATG GTGTGCAGTT TCGTGCAAGT ATAACCACAG 000960 000961 AGACAGACAA ATCTCTATCA TTGCCACAGA CTGCTTATAG CAAAATTCCA GAGCTCCTGT CATTGGTCTT TAATAGTTGT 001040 001041 GCTTTGTTGC TTTTGTTACC ACGTGTGCAT TTGTGTCAAC ATTATACAAA GCACTCTTTC TCACAAGAGC TAGTTTCACT 001120 001121 CTACAACCAT ACTGTAAGAC AGGTATTGTT TTAAGATCAA GAAACCAAGG CTCTGAGAGG TTTAGTGACT CACCTAAGAT 001200 001201 CATGAACTAA TAATAAGTGA CGGATCAGGG ACTTGACCTG GGACATTGAT GCCAATTCCA GGGCACCTTC CACCGTGTCA 001280 001281 TATGGCACTT GCTCTACATA TGTGCCAGGC AGCACCCGCA TGGCTTTTCC TCATGAAACA ACGTGGACCC AGGCCTACAC 001360 001361 AGCAGTTGTG AGAAAGTGCC TCCAGCTGGG AGCGCATCTG GCCCAGGGCA CCAGCTGCCA CTCCATGCTC TGAATCCATC 001440 001441 CTGGCCTGTG CTGAGACCCC CCCTTTCCAT GGGCTGCTCC CCACCCGTGA TGGGGCATGG CAGGGGCACT AGGCAGCCCC 001520 001521 CTTCCTGAGA GACATGGGGC TCCTCTGCCT AGAATGTTGT CTCAGCACTT CTCTTCTGCC TTGCTGAACT TTCCCTAGAG 001600 001601 CCAAGGAGGC CTCCATACAA CCTTTCCTCT CCTTCATTTG GAGTCAGACT TGCACTGCAG TCTAATGGTC ATCCCACTTT 001680 001681 TTTCCAGCTC CCTGATAAAA TCTATGGCTT CTGCTTCTTG GAGGACCCAG ATTATCACAG CTTATCTCAT TCCTTTGCAG 001760 001761 CAGATGCCCC TGCAGGCCAT CTCTCCAGGC TCAGGAACCT AAAGAAGAAT CTACCCAGAT GTGGTGGCTC ACACCTGTGA 001840 001841 TCCCACCACT TTGGGAGGCT GAGGCAAGAG GATCACTTGA GCCCAGGAGT TGGAGACCAA CGTAGGCAAT ACAGCAAGAC 001920 001921 TCCCATCTCT ACAAAAAAAA AAAAGAAAGA AAGAAAGAAA GAAAAGAAAT TAGCTGGCTG TGGTGCTGCA CATTTGTAAT 002000 002001 ACCAGCTACT CTAGAGGCTG AGGCTGGAGG ATCACTTGAG CCGAGGAGTG AGCTATGACC ACACCATTGC ATTTCAGCCT 002080 002081 CAGTGACAGA GCAAGGCCCT GCCTCAAAAA AAAAAAAAAA AAAAGAAAAG AATAAGATAA AATAAATAAT ACAGGAGAAC 002160 002161 CTAGTGCTCA GGTTCTCTAG TGAAGAGGAA GGCAAAAGAT AGAAAGGTCA GACAAACTTA AACATGCATT CCAAGATCGG 002240 002241 CCTGGGTCCG CCCGTAGACA TGAAGGAATC TTCTGGTGGA AAGTTAGGCA GGGAAACGGA CACTGCTATG AGCATGTCTT 002320 002321 CCTGGGCAGC TTGCGATGGT CAGGAGGAGG TGGTTGTTCC TCAGCAGCGG TGCTTCCGAT GAAGCCCCAT GTTGTAGTGG 002400 002401 AAGACAAGCC ATTCCTGTCT GACCTTCTGT GCCGCGCCTA GGCTTCCAAA AGCTGCTATC GCCAAGATCC ATTTCCGTTC 002480 002481 ACCTTTAAAC TGCTTGTTAT GGGGAGGAGT CAGCCAGCCA TGATGCATAC TTGTTACAGA AAGAAACGCC CACGTTGAGC 002560 002561 TCTCCTGATA AGAAGAGAGA GCATTCGTCA TTGTCTGTAT CTGTCATCTG AAGAAGGAAC CAATGTCAAA AATCCCACAC 002640 002641 ATTCTCCTCC CGCAAGTCAC AGAGTAAGCC TCCCATTCTT GAGCTCGTTC ATTCACCAAA CACATTCTGA TCTCTCCTGT 002720 002721 GCCCAGGCGG TGGGATTCAG AGAAGAAGTG CTGCCTAGTA GTCAGCACCC AGTGCCAGGA AAACAGGACA AGGGGAGTTG 002800 002801 TCGGGGGAGA CACCAGGATT GAAGTTGCTT TTACTAAAAA ACATTTTTTT TATCTTGTTA ACAAATATAT TTACCATGGT 002880 002881 ACATGGTGGC AATGCTCTCA GTTTTAAAAC ACAGCAATTA TCTTCCAGTG GTCACTAATT AATCCAGGTG TGGCTAGGAA 002960 002961 CAGCTGGATA CTGATCTGTG TGATGATGGC ACCTCTATCA TCAGGCTGCC ATTGCTGGCA CTTTGGGCAA GGTGGACTGG 003040 003041 GGTTCTGCTC TGGGGCTGTG TGCCCAAGGT TTACACCTCA CTATTTTACA GCACACTGGA GCTCCCAACA GTCCCCGAAG 003120 003121 GTCTGGAGAT CACCAATGGG CAGGAGAGAA GGGAGGGGTT TAGACATCAG GGAGCCAAGT TCTACAGCAT CTTCTAGATC 003200 003201 CAGGCTATCG AGCACTTGAA ATGCGGCTAA GTCTGAATTG AGATGTGCTG TGTGTAAGAG ACACAACAGA TTTTGAAGAC 003280 003281 AGTATGAGAA AAAGAACATA AAATATCTCA GTAATTTTAT ATTGATTACA TGTTGAAATG ATACTAATTT TTGATATACT 003360 003361 GGGTTAAATA AAATAGATTA TTAAAATTAA |
Predicted Small Protein
Name | NONHSAT099566_smProtein_1664:1801 |
Length | 46 |
Molecular weight | 4835.7047 |
Aromaticity | 0.0666666666667 |
Instability index | 52.6488888889 |
Isoelectric point | 9.99237060547 |
Runs | 9 |
Runs residual | 0.0377525252525 |
Runs probability | 0.0212958056095 |
Amino acid sequence | MVIPLFSSSLIKSMASASWRTQIITAYLIPLQQMPLQAISPGSGT |
Secondary structure | LEELLLLHHHHHHHHHHHHHHHHHHHHHLHHHLLLHHHLLLLLLL |
PRMN | - |
PiMo | - |