NONHSAT099658
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT099658 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1721 nt |
Genomic location |
chr4-:187337280..187422212 |
Exon number |
7 |
Exons |
187337280..187337490,187344883..187344986,187345244..187345390,187347391..187348252,187352772..187352922,187353299..187353392,187421999..187422212 |
Genome context |
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Sequence |
000001 GTTACCTTCT CAACATGGCG AGCTTGCTGG ACGTCACGTC GCCTTCGCCT TTTCCGCTGC GGACTCTGCT CACCGACCTC 000080
000081 CTCAGTAGAG CCGGCCCTGC TCACTACCGC GCCCACGTGT CCTGTTGTGC TTCATTCCCA CAGGCCGCAT AAGAAGTGGG 000160 000161 TGCCGAGGCT CCCTTCCCAC TGCCATTCCA CTGGCCCAGA GGAAGCTTCT GTTGTGTTCA GATGGGCAGG CACTCTTCCT 000240 000241 CGAGAAGTTA AGTAGCCGGA ATATCTAAAT GCCTCTCCTT GGCGATTACT CGATGAGCGC CTGTCCTTCC TCCACTCTTC 000320 000321 CAGCAGACCT GCCTTTTGGG GCTGATGGAA ATATGCATAT TAGATTATCT GCAGAAACTG GCTCAGCACT ACAAGGAGGC 000400 000401 TGCCAACATG AAGACACTGG ATGCGGAATC AGGAGGAGAT GTATACAGCT CAGTCTCCAA AGCCAGGACA AGCCAGCTCC 000480 000481 AACACACTAC TGGCTGAATC TCACCAATCG TTATAGTTTT GTTTTTTGTT TTTTTAAATG TATTTAAGCA TTTTTAGGTG 000560 000561 TTTTAAATTT TATGTGTGTA TTCTAGGAAT ATGTACTCAG ATTCTTTCAT TAGGCATGTG TTATTAACAA CATTCATCTT 000640 000641 CTTAAAGGCT GAACCAACTT TGCGCGTTTT ATCAACAGAT ATTCACTGAG CACCTAATAT TGCCAGGCTG TGCTCAAGGC 000720 000721 AGTGGGATTC ATCAGTGAAC AATACAGACA AAAATCACTG ACCTAAATGG AGCTTGAAGT TTATATCTAA ATCATTCAAA 000800 000801 GATTCTGTGG TGGAAAAGAA GTTAGAAATC TTTCAGCTGC AAAACATAAG CCAAAATACA ACTCACCTTT GGAATCAGAG 000880 000881 AACTTACAGG TTCATAAAAT TGCGAAGCCC AGATGTGCAC CTGAGGTGAG ACTTCGTCCA GCTTCTGTCT GTGTCACTAA 000960 000961 TCTTTCCTGC TTTCAGCGGC ATCCCTCGCA GGCCCGTGTT GTTCCCAACT GGTGTTCCCA CCTGGCGGCA AACTGGCGAC 001040 001041 TGTAGTTACA GATCTTCAAC ATCACACTCA GGAGAAGAAG GAGATTGCTT TTCAGGAGCT CCTGCAAGCC GGAGAATAAA 001120 001121 AGCTCTTATT TATTCAGAAG CCCTAAAACA TACCACCTTG GCTATAGACT ATTTGGACAT TTCTAAGCAA ATCTGTCTGC 001200 001201 AAAGGTGCTG AGCTGTGTTG ATCAACTGAA GCCCGTGACG TCTCATCCTT GCAGTTGGAG CAAATCTCAA AGGCAAAGCC 001280 001281 AGTGTTAAGG AGAGGGAAAT CAGACTTCAT CTTTTGATGG GAGAAGAAAA GAGTTTGCAA CTGTCTCTAT TCTGCCACTG 001360 001361 GCAGAGAATC CATAGGTTTG CTAAGGATAC AGAGCCACAT TGAAAAGATA AACCTTGCTA TGCTGGAGAT TACTTAGGTG 001440 001441 GGCCAGGATT TCTTGAAACC AAAACTTTAC TGAATCACCT CTTCACCATC TGTATGCCGT GCATTTGCTG AGAGATAAAA 001520 001521 ACATTCCTGT GAAAGATGCC CTTCCCTGCA CCGGGAGAAA AGAAGCATTC TGCGACCAGG AGCCATAGCG AAGATAATTC 001600 001601 TGTAGAAACA GACCGTGGTA AAATAATGCC TATCTTCCTG CAGCCTCCCC ACGTAATTTA GTTACTTTTC CACAGCTGCT 001680 001681 TCTTTTTGCT CAACCTAATA TCAAAGCAGT TAGGTATTGC C |
Predicted Small Protein
Name | NONHSAT099658_smProtein_344:496 |
Length | 51 |
Molecular weight | 5532.1576 |
Aromaticity | 0.06 |
Instability index | 46.944 |
Isoelectric point | 6.00213623047 |
Runs | 7 |
Runs residual | 0.0246783625731 |
Runs probability | 0.0264087617029 |
Amino acid sequence | MEICILDYLQKLAQHYKEAANMKTLDAESGGDVYSSVSKARTSQLQHTTG |
Secondary structure | LEEEHHHHHHHHHHHHHHHHHLLLLLLLLLLLEEEHHHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |