NONHSAT099990
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT099990 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
747 nt |
Genomic location |
chr5-:1175088..1176106 |
Exon number |
2 |
Exons |
1175088..1175803,1176076..1176106 |
Genome context |
|
Sequence |
000001 GTTTCCACAG CCACAGAGAC GGTGCGTGAA GGTGAGGTGC AGCCTAGTGC ATATGACTGA CAGAAACGTG AAGCCACAGT 000080
000081 GGACGCCTGG ATGAGACACA GATCACCTTC CAAATCTGAG TGTGGCCTTG GGACCAACCA GGCAGCCAGG GAGAAGGCAG 000160 000161 AGACCAGAGG GAACCCAGGT GCcctcaatc ccagcctcct ctatcccagc ctcccaatcc cagcctcccc aatcccagcc 000240 000241 tcctaatccc agcctcctcc atcccaggac ccccactccc agcctcccga tcccagcTTC TCTGATCCCA GCCTCCCCTA 000320 000321 AAACCCAGAC TCTATGAATC CCAGcctctg aggtgggaac tgttagtaac cccactccat ggacaagaaa gctggggcct 000400 000401 ggcgaggcta aCAGACTATC CTGATGGTGT GAGGGAGGGA TCGGCCTCTG AGGGCTGCTT CCACCCATCT CACCAGTGGC 000480 000481 TGCAGGCTCC AGGCGCCACT TTCCTTGAGT CTATGTTCTT TCCAAGCATC CTGCAGCTCC AGAAGCTCTG GAGCCGCCAG 000560 000561 CACTGAGAGA AGCGATGGAG CTGCATGCAG GGTGAGTGTA GGACCGGGCG GAGCTGCTCT GTGGCTGGCG GGCACATTCT 000640 000641 TTGTCAACAT GAGCATCTCT CACTGTTCCT AGACCCCCTG GCtccccagc ttccttggag ccaggcgtgg ccacaggaaa 000720 000721 atgtttaggt caatgacagg tgagcaa |
Predicted Small Protein
Name | NONHSAT099990_smProtein_584:727 |
Length | 48 |
Molecular weight | 5228.8789 |
Aromaticity | 0.063829787234 |
Instability index | 67.2446808511 |
Isoelectric point | 5.75103759766 |
Runs | 9 |
Runs residual | 0.0252127659574 |
Runs probability | 0.00779210583131 |
Amino acid sequence | MQGECRTGRSCSVAGGHILCQHEHLSLFLDPLAPQLPWSQAWPQENV |
Secondary structure | LLLEELLLLEEELLLLEEEELLLHHHHLLLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |