NONHSAT099994
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT099994 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1323 nt |
Genomic location |
chr5-:1177910..1179415 |
Exon number |
2 |
Exons |
1177910..1178369,1178553..1179415 |
Genome context |
|
Sequence |
000001 CGGGTGCCTC TCGCCCTGCA GGACGTGGCT GGCCTGGTCT GCCCCCAGCT GAGCCTCACC TGAGGGAGAG CTGGGGTGGG 000080
000081 CCGCCTCGTT TACGACCGTG TAGTCGTCTT TTGCACACAA AGCCATGTGA GTCCGTACGT GAGTCCTGTG GAAAGACAAG 000160 000161 ACATGGAATA GGAGTGACGT CCGTCCCCAG GCATGAAGTG GAGAGCATCA CGCTGTGTGA GTTAAACACT GGCCAAGCAC 000240 000241 GGTGTGAGTC GGAGCCGGGG ACCTGGCCAG ATGAGGGCTG CGTGCAGCTT TCACACCCCA GGCACGTGAG CACCGCCAAG 000320 000321 CCCAGCCTCA GCCAGCAGCT GCTCTGCAAT GTGGAGTCAC CAGTGGCCCC AAGGATGGCA GGTGGGGGTG GCCTTGGGAC 000400 000401 TGAATTAGGC CGACACCCAA GGCCTCTGTT CCTTCCCGTC CCTTCTCTCC CTTCGGAGGA TCAAATGAGA GTTTCTAGGA 000480 000481 AAGAAAACAT GGCCAGGCCC TCCTCCAGCG CCCAGGCAGG GCTCGAGCGG ACGCCCGTGT GACCCCCACA TCCCTTCTAC 000560 000561 CCCTGTAGCT CTCTGACTCT GATATCCCAG TGggaggaac gaggagggga cgggtgagga ggaggaagag gaggagacat 000640 000641 gagggttagg aggagCACAT CCTGAGTTTG TGAGGCTTCA CTGACCTCTG GCCTCACAAA CACACACAGG CCTGAGCTCC 000720 000721 GGATATTTCT CCTGTTCTGG AGACAGTGAG AAGTGAAAGA GAAATGGCTG CCCCTGCACC ACTTACCGCG AAGGAGGCTC 000800 000801 AAGGCTGGGG GGCCCCTCTG CCTTCCAGTG ACCGCCCGTG TCACATCCTG ACCCGCTCAG CAGgagagac ggccagaggc 000880 000881 atggatgcac gctgactcgt ggacggccgc tGTTTGACGA GACCATCAAG GAGGGAGGAG CACCCGTGGA AAGGCGTGGC 000960 000961 AGGGTGGTCG GGGCAGAGGT GTACATCAGC CTATCCAATG CTCACGGCTG GAGGACGCCG CGCCCTGTGA ATGCTCACTG 001040 001041 AGGACCATCC CGGGCACTGG GGCTCTCCAT GTGAGAATGG ACAATATGCT GCCTTCCCAG CTGCCCCATC CTTCCTGCGA 001120 001121 GAGCTTGGGG ATGGGTGGCC ACAGTGGCAC TGGGGAGAAC ACGAGGGCTC CCCAGCAAGC GTTTTCTCTC ATGGAGGTGG 001200 001201 CTCTGGTCAC AGCGTCACTG CAGGGCGCAG CCACGGTGGC GGCCAATGGA AACTGGGCtc ttctttttct tttttttttt 001280 001281 gagacagagt ctcgctctgt cacccaggct ggagtacaat ggc |
Predicted Small Protein
Name | NONHSAT099994_smProtein_374:541 |
Length | 56 |
Molecular weight | 5827.5946 |
Aromaticity | 0.0181818181818 |
Instability index | 75.7581818182 |
Isoelectric point | 10.5670776367 |
Runs | 7 |
Runs residual | 0.0242424242424 |
Runs probability | 0.0130718954248 |
Amino acid sequence | MAGGGGLGTELGRHPRPLFLPVPSLPSEDQMRVSRKENMARPSSSAQAGLERTPV |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLLLLHHHEEEEHHHLLLLLLLLLLLLLEELLL |
PRMN | - |
PiMo | - |