NONHSAT100207
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT100207 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
512 nt |
Genomic location |
chr5-:6603982..6604821 |
Exon number |
2 |
Exons |
6603982..6604389,6604718..6604821 |
Genome context |
|
Sequence |
000001 TCATCTTATT TTTTTACTTA CAGGTTATTA ACACGGGGAT CAAAGTCTGG TGTAGAAATA ACAGCGGTGA AGAGTTTGAC 000080
000081 TGTGCTTTCC GGCTGGCACA GGAGGGAATA TATACATTGT ATCCATTTAT TAACTCAAGA ATTATTACTG TATCAATGGA 000160 000161 AGATGTTAAG ATACTGTTGA CCCAGGAAAA TCCCTTTTTT AGAAAACTCA GCAGTGAGAC CTACAGTCAA GCAAAGGACC 000240 000241 TGGGTGAGTA GTTGGAAATG CATAGAGACA TAACTTGTAT TCCCTTTATA AGGCCAGCAA AAATGCAGGT GGTGTGCGTT 000320 000321 GGGGCATATT TATCAATCAT AGTTTTCAGT TTATTTATGG CTACATCAAT TTCCAGAGGG TTCTGTAGAT CCCTGATTGA 000400 000401 CAGTTCAGAA TGCTAAGGGT CAAAGGCATC TTGGGGTTGG TGTACTTCCC CAGGCTCTGG TGGTGCCCTG CTGCTGCCCA 000480 000481 GCAGCCTGTG GTGTGTCTGT GTGGCGTGCA GG |
Predicted Small Protein
Name | NONHSAT100207_smProtein_257:415 |
Length | 53 |
Molecular weight | 5814.9313 |
Aromaticity | 0.0961538461538 |
Instability index | 60.8576923077 |
Isoelectric point | 8.50543212891 |
Runs | 10 |
Runs residual | 0.041938287701 |
Runs probability | 0.0820261437909 |
Amino acid sequence | MHRDITCIPFIRPAKMQVVCVGAYLSIIVFSLFMATSISRGFCRSLIDSSEC |
Secondary structure | LLLLEEELLLLLLLLLEEEEELLLLLEEEHHHHHHHLLLHHHHHHHLLLLLL |
PRMN | LLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTTooooooooooooooo |