NONHSAT100208
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT100208 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
715 nt |
Genomic location |
chr5-:6604914..6607039 |
Exon number |
2 |
Exons |
6604914..6605521,6606933..6607039 |
Genome context |
|
Sequence |
000001 gattcccttt ttagtcctcc tccatcaaag aaaatgaagt tatttggATT TAAAGAAGAT CCATTTGTAT TTATTCCTGA 000080
000081 AGATGACCCA TTATTTCCAC CTATTGAGAA ATTTTATGCT TTGGATCCTT CATTCCCAAG GATGAATTTG TTAACTCGGA 000160 000161 CTACAGAAGG GAAGAAAAGG CAGCTCTACA TGGTTTCTAA GGAGTTGCGG AATGTGCTGC TGAATAACAG TGAGAAGATG 000240 000241 AAGGTGCCAG CCGCACAGAC GCTGAGTGCT GTGTGATGCG GGATGCGTGT GGCTTTTCAC AGCGGCTTAG ATTTCATTTG 000320 000321 GAGCAGACCG TGACATCTGC CCTCCCCACC TGTAGCGCTG GCTGTGGGTC CCTGAGCCTG CCCTTTGATT TCAGAGCTGT 000400 000401 TGACTGACAC AGGGCTGAAT GGTTCCTGCC AGAGTCCTGA ATCTGGTGGC CTGTGTCTTT TCTGTGCCCC ATTCCCGCAG 000480 000481 GGGGGTGAGC CATGGTGTAG TTCTCACAGC TCGCCCTCCT GGGCAGAGAA GGTACTAAAG GTGTAGAGGC TGCGAGTACT 000560 000561 GCTGCCCCGA CCCTTGGGAT TTGTCCTTTG AGGTACTTCC CTTAGAATTT GGCCATTTGG GGGCCCTTCT TTCATTTGCT 000640 000641 TTACTGTCCT CCAAACGACG TAATCACAAG TTGTGAGTAT CAGTTCGTTC TTAACCGGGG TTTCTCGGTG GGTTT |
Predicted Small Protein
Name | NONHSAT100208_smProtein_275:406 |
Length | 44 |
Molecular weight | 4692.296 |
Aromaticity | 0.093023255814 |
Instability index | 40.7534883721 |
Isoelectric point | 6.51385498047 |
Runs | 5 |
Runs residual | 0.0410243010191 |
Runs probability | 0.0244126479421 |
Amino acid sequence | MRDACGFSQRLRFHLEQTVTSALPTCSAGCGSLSLPFDFRAVD |
Secondary structure | LLLLLLLLHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLEEEEL |
PRMN | - |
PiMo | - |