NONHSAT100219
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT100219 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
928 nt |
Genomic location |
chr5+:6766024..6777723 |
Exon number |
4 |
Exons |
6766024..6766094,6775672..6776142,6777163..6777271,6777447..6777723 |
Genome context |
|
Sequence |
000001 AACCACCCTG CCAGCCTCCC TGCTGCAGCC GGCAGCACGT CACTCCATGC GGGAGGGGAG CCCCACCTAA GGTTCTTGGC 000080
000081 CATAAAATAT GGCTTTTGGA AAAATAAAGC TGAGACTTGG AGTTCACGGT GGGGGCTCCC CCATCTGTGA ACAGAAGCAG 000160 000161 AAGTTTGGAA CTGCCTTCTT TACTGCTCGA GAGGGAAAAC TTGAGTGAAA ACCAGGATGC TGGCGAATGT TGAGTAGCTA 000240 000241 AGCTGCACAG GAAATACCAC TTGATGACCT GCGATCTGGG GAAGCCGCGC CAGGGCTCTG CGAAGCTGCG GACGAGGGAG 000320 000321 GCGTCAGTGT GGGGGCTGCA GCTCAGCTCC GGGGGGGACG CGCCTTTCTC CACGGGACCT GGGGCTCAGG TGCTCACGAG 000400 000401 GCTGGGGCGC TGCAGGCCAC CCGCAGGGGA AACTGAGGCC CTCCATTTTG TGGGGCTGGA AGACCTTTCC TTCCAAAAGC 000480 000481 AGGTGTAGGC GGGAGCACCT GTGCAGTCCC TCTGTTCAGA TCCTCACCCA CTTTTAAATC AGGAAACAGC AGATGAAATG 000560 000561 CACAGTGTGA AGGACAAGGA TTCTGCTGAG AGAATTGCTC CGAGGGTTGC TCAAGTGATC ATGGGAAATA ATGCATCAAA 000640 000641 CCATTCTTTA GATGCAGCTC AGGTGTGCCT TTTCTTCGCC TGTGCCCATC CACCTGAGAT GGACCATAAC CATAAAAGTC 000720 000721 AGAAGGCACT GACCCTTCAG GACGTGACAG GGTTAAAAGA TGCTGGAGGG AAAGTCTGTC ATTGACTTTT ATTCACTTCC 000800 000801 TTTCTCCATT CTGCCATTTG GAAGAAGGTA AGCAACTTAA CACTATTTTA GACCATATGT TGTAAACTAG CAGGAAAATG 000880 000881 CCTTTGAGCT GATGATGGTG GCCCGAACAC AGTGAACCTG TCTTAAAT |
Predicted Small Protein
Name | NONHSAT100219_smProtein_557:784 |
Length | 76 |
Molecular weight | 8092.1135 |
Aromaticity | 0.0266666666667 |
Instability index | 44.9013333333 |
Isoelectric point | 7.00006103516 |
Runs | 10 |
Runs residual | 0.0156028368794 |
Runs probability | 0.0465377141847 |
Amino acid sequence | MHSVKDKDSAERIAPRVAQVIMGNNASNHSLDAAQVCLFFACAHPPEMDHNHKSQKALTL QDVTGLKDAGGKVCH |
Secondary structure | LLLLLLLLHHHHHHHHHHHHHHLLLLLLLLHHHHHHHHHHHHLLLLLLLLLLLLHHHEEE ELLLLHHHLLLLLLL |
PRMN | - |
PiMo | - |