NONHSAT100714
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT100714 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
908 nt |
Genomic location |
chr5+:21471505..21474167 |
Exon number |
2 |
Exons |
21471505..21471710,21473466..21474167 |
Genome context |
|
Sequence |
000001 ccggggtggg ggctgcctag gcgtatttgt ggtattgacc acgttcttgt ttttgtttgt gaccaggcca gattacagag 000080
000081 gggtattgat ttgccttgcc cccgccccca ccatcacagt gtgtccctgt ccagtgttgg tgctgtgtgg cattggcttg 000160 000161 tgtccatagg agtccatcaa ggcagagcgg cagagtggga aggcagTTCA ACCCAATGGA AATGGATTGA AAGAGTGAAA 000240 000241 GTCACTGGTC TCAAAGAATC TACGGAATTT AGCATTTTGA AAATCACATA GCAATTTTGG GTAGGTATTC ACCTGCACTA 000320 000321 AAAAACCAGG CAAACATCCG ACTCCCAGGA TAAAGTGACT GAGAGCAGTA GAAGACTTGT TGAGCCTTAA GGAATAAGAG 000400 000401 GAAAATTACG TTATGAAGTG CAGGAACAGC ACAGACCCAG ACGAGGGGAC GCAGCCCGGA GCCAGTAACC CGGCGCCACC 000480 000481 TCCTCCCCAG GGCGCAGCGC TGGCTGATCC CCAGATACCG TGATCACACG TCCCGGGTCC TGAGAGCGCC TCATAGGTAG 000560 000561 ACAGTTCTTT GGGACTTCTG GGATGCAGCA CTTGAAGAGA GGTTTACCTA AACTTTCCTC CTGGGAGCCT GTGATCATTT 000640 000641 GAAAGTAACA GAAGAAAGTT GTCAGGCTGA GGAAAGTTTC AACAGGCACT TGGTGAGAAT GGGAAGCATC CATTCATTGT 000720 000721 GAAATCGCGG GGACAGAGGA GGAATTCACG GGATCAGAGC ACTGAGAAAC TCCAGAGGCT TCTGGTTCAC CGCCCTGATT 000800 000801 CCACAGATGT GGGTCAGAGG CAGAGATGGA AGTTGGAATG GACAAGCCTG CCCTCTCCTT GGCTCTCCAT GGCTCTGTCC 000880 000881 TCAGGCTGTT TCTGCAATTT GACATGAG |
Predicted Small Protein
Name | NONHSAT100714_smProtein_806:901 |
Length | 32 |
Molecular weight | 3356.8554 |
Aromaticity | 0.0967741935484 |
Instability index | 53.3709677419 |
Isoelectric point | 7.83428955078 |
Runs | 5 |
Runs residual | 0.0399865591398 |
Runs probability | 0.00363893305069 |
Amino acid sequence | MWVRGRDGSWNGQACPLLGSPWLCPQAVSAI |
Secondary structure | LEEELLLLLLLLLLLLLLLLLLLLHHHHLLL |
PRMN | - |
PiMo | - |