NONHSAT100928

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT100928

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1108 nt

Genomic location

chr5+:32522864..32523971

Exon number

1

Exons

32522864..32523971

Genome context

Sequence
000001 ATGGCCCGGG GGCCCGGCCA GCTAGGCAGG CCTCGCCCCG ATACGGTCGC CATGCCCAAG AGAGGAAAGC GACTCAAGTT 000080
000081 CTGGGCCCAC GACGCCTGCT CTGGACAAGT GACTGAGGTG GATTACGCCA ACTCGGATCC AGCGGTCGTG AGGTCTGGAT 000160
000161 GAGTCAAGAA AGCCTTAGCC AACGCTGTTC AGCAGGAAGT AAAATCTCTT TGTGGCTTGG AAGCCTCTCA GGTTCCTGCA 000240
000241 GAGGAAGCTC TTTCTGGGGC TGGTGAGCCC TGTGACATCA TCGACAGCGG TGATGAGACG ATGCCCAGGA GGAAAGCATC 000320
000321 TGTGAGAGAA CTGTCTCCAG AAAAAAGAAA AGCAAGAGGC ACAAAGAAGA ACTGGACGGG GCTGGAGGAG AAGAGTATCC 000400
000401 CATGGATATT TGGCTATTGC TGGCCTCCTA TATCTGTCCT GAGGACATTG TGAATTTTTC CCTGATTTGT AAGAATGCTC 000480
000481 GGACTGTCAC TTGCACTGCT GCCTTTTGGA CAAGGTTGTA CCGAAGGCAC TACACGCTGG ATGCTTCCCT GCCTTTGCGT 000560
000561 CTGCGACCAG AGTCAATGGA GAAGCTGCGC TGTCTCCGGG CTTGTGTGAT CCGATCTCTG TACCATATAT GTATGAGCCA 000640
000641 TTTGCTGCTC CAATCTCCAA GAATCCAAGC ACCCCCAGCA CATTAAAGAA TTCCAAATGC TTACTTTTCT GGTGCAGAAA 000720
000721 TATTGTTGGG AACAGACAGG AACCAATGTG GAAATTCAAC TTCAAGTTAA AAAAACAGGT TAAAGAGCAA GTGTACAGGA 000800
000801 GGATTGCAGC CCCCTGTTCA GTACGAAGAT GTTCATACCA ATCCACACCG GGACTGCTGC CTACTGCAGG CCACCACCCT 000880
000881 CAATTTCATC TTCATTCCGA TTGTCATGAG AATGATATTT ACTCTCTTTA CTATCAATGT GAGCAAGGAC ATACGGCATC 000960
000961 ATTGAGTGAG ACTGGTGTTT CAAGATTCCC CTGTCCATGG TGGTCGGAAA CTGTGCAGTG AACAGGGTGT GCAAGTCATC 001040
001041 CTGGACCCAG TGCACAGCTT TCGGCTCTTT GACTGATGGC ACCCTCAGTA CCCATTCTCC CTGAGAGC
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Predicted Small Protein

Name NONHSAT100928_smProtein_401:685
Length 95
Molecular weight 10986.9827
Aromaticity 0.0851063829787
Instability index 83.0042553191
Isoelectric point 9.29840087891
Runs 12
Runs residual 0.00115633672525
Runs probability 0.0385458988401
Amino acid sequence MDIWLLLASYICPEDIVNFSLICKNARTVTCTAAFWTRLYRRHYTLDASLPLRLRPESME
KLRCLRACVIRSLYHICMSHLLLQSPRIQAPPAH
Secondary structure LLHHHHHHHHLLLHHHLLHHHHHLLLLEEEEHHHHHHHHHHHHLLLLLLLLLLLLLHHHH
HHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLL
PRMN -
PiMo -