NONHSAT101085

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT101085

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1609 nt

Genomic location

chr5-:38282366..38291088

Exon number

4

Exons

38282366..38282703,38284025..38284205,38285791..38286463,38290702..38291088

Genome context

Sequence
000001 AGGGAGCCTC CCCGAGTAGC TGGGATTACA GGCGACTGCC GCCACCACGC CCGGCTAATT TTTTAAGTAT TTTTAGTAGA 000080
000081 GACGGGTTTC ACCGCGTTAG CCAGCATGGT CTTGATCTCC TGACCTCGTG ATCTGCCCTC CTCGGCCTCC CAAAGTGCTG 000160
000161 GGATTACAGG CGTGAGCCAC CGCGCCCGGC CGACCCCTGT AGGGTTTTAA AGGAGAGAGG CAGCATCCCA GAGGGCAAAA 000240
000241 AGGGCTTCAT TCATGGAGAA AGCAACTGAG CTGGGCAGAG CACAGACGGA ATTTGAATTG GAGGCCAGAG GCAAAGGGAA 000320
000321 CTCCAAGTGG AAGAAGAAAC GGCATGAAAA AAGGGATTGA GAAGGAAAAG GACAAGATGG TTTGGAGAGA GAGCAACTTC 000400
000401 AGCCTGGAAA AGCAGAAATG AGATGCGGCC AAGAAAAAGA CTCCAGCCCA GCCTGCCTTG GTTCTAACCC TGACTGTTAC 000480
000481 TTAACCTCTT TCTGGCTCAG TCAAGAAACT TGAGCACTGC AAGATGATCA TGTGGAATAC CTACTTCAAA CGGATGTTAA 000560
000561 GAGGAGTAAA AGTGTTCTTG TTTCTAAGTG CTTGAAATGC AGCTGGCATA TAATTAAGCT ATGCAAATAT TTACTTTTTT 000640
000641 TTTTTGAAAT GCTGAGTTTA CTGATCACTC TAATTTTTAC ATATGTGTGT CATTACAGAA GATTCAGGCT TTAGCGATGA 000720
000721 CTGGAGGGTC ATTCGCTGGA AAGAATTTCA TCAGTTGGAA CTAAATCATG GTGAGCAAAA GAAAGTCTAC CTAAGTGATA 000800
000801 TGGTTTGGCT CTGTGTCCAC ATCCAGATCT CATCTCGAAT TGTAATTCCC ACAAGTTGTG GGACGGAGGT GATTGAATCA 000880
000881 TGGGGGCAGG TGCCCCAATG CTGTTCTGGT GATAATGAGT GAGTCCCCAA GAGAACTGAT GATTTTATAA GGGGCTCTTC 000960
000961 CCCCTTCACT TTCTCTTCTC TCTCCTGCTG CCTTGTGAAG CAGGTGCCTG CTTCGCCTTC TGCCATGATT GTGTTTCCTG 001040
001041 AGGCCTCCCC AGCCATGCAG AACTTAGTGC CTCACTTTGG AGTCGGCTGA GAAGATCATT CCAGACGGGA GTTTTGACAC 001120
001121 TGTACAAATG CACTGTCTTC ACATCTACGC TGACACCCCT GCCTTTCTAC CTGCAGGTGT CTGTGGCTTA CAAGCTGGTG 001200
001201 CCTCCCACAG ACCCTGTAGT TTGGAGCTAA TGAAGAGCTG AGAAGCTACC AGGATCTGCA ACTTTTTGCC TGAGGGTTTT 001280
001281 CTCAGAAGAC ACAGAAACTG TTCTGCCTAT AAGCCTTGAA GTGCCAGGGA ATTAACACCT ACCTTCCCAC AGCCCTCCCC 001360
001361 ACAGTGACTG ATAGCATTGA TAACGATACC CAAGCTTCAC CCCTCAGGTG GGATAACTGA GCTGCTTGTT CTATACCATG 001440
001441 TTCTAGAGTT TCTCCCATGA GTTTAGGTTC TAATCATCCA CATGTAAATT GCTTGATAAG AAACCTTCAT TGACTCCTTG 001520
001521 TCTCACTTCC CCTCCCCTTA TTTGTTTTGT TTGCACCTTT CAAATAAACT ATTTTCATCC AAAAAAAAAA AAAAAAAAAA 001600
001601 AAAAAAAAA
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Predicted Small Protein

Name NONHSAT101085_smProtein_1127:1240
Length 38
Molecular weight 3926.5909
Aromaticity 0.0540540540541
Instability index 67.6351351351
Isoelectric point 6.79583740234
Runs 7
Runs residual 0.009422266303
Runs probability 0.0447548388725
Amino acid sequence MHCLHIYADTPAFLPAGVCGLQAGASHRPCSLELMKS
Secondary structure LEEEEEELLLLLLLLHHHHLLLLLLLLLLHHHHHLLL
PRMN -
PiMo -