NONHSAT101151
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT101151 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
668 nt |
Genomic location |
chr5-:40777118..40798261 |
Exon number |
2 |
Exons |
40777118..40777688,40798165..40798261 |
Genome context |
|
Sequence |
000001 GCGACAGCCG AGAAGCAGAA ACACGACGGG CGGGTGAAGA TCGGCCACTA CATTCTGGGT GACACGCTGG GGGTCGGCAC 000080
000081 CTTCGGCAAA GTGAAGGTTG GCAAACATGA ATTGACTGGG CATAAAGTAG CTGTGAAGAT ACTCAATCGA CAGAAGATTC 000160 000161 GGAGCCTTGA TGTGGTAGGA AAAATCCGCA GAGAAATTCA GAACCTCAAG CTTTTCAGGC ATCCTCATAT AATTAAACTG 000240 000241 TAAGCTCTGT TTATATTAAA TATAGTCCAG TCATCTTTTC ATCTTTTTTG TTAACCTACT TAATGTGACA AGTGAGAAAA 000320 000321 ATGACTGACA CTTCTTTTTG TTTCCTAAGG GTTTTGAAAA GTTTCTTCCT Aggctgtgtg cggtggctca cacctgtaat 000400 000401 tccagtactt tgggaggctg aggcaggcgg atcacctgag gtcaggagtt cgagaccagc ctggccaaca tggtgaaacc 000480 000481 ctgtctccag taaaaataca aaaattagct gggcatggtg gtgggcgcct gtaataccag ctactcggga ggctaaggca 000560 000561 ggagaatggc ttgaacctgg gaggcggagg ttgcagtgag ctgagatcgt gccattgcac tccagcttgg gcaacaaaag 000640 000641 cgaaactctg tcccaaaaaa aaataaaa |
Predicted Small Protein
Name | NONHSAT101151_smProtein_320:475 |
Length | 52 |
Molecular weight | 5828.7427 |
Aromaticity | 0.156862745098 |
Instability index | 67.4254901961 |
Isoelectric point | 7.82391357422 |
Runs | 7 |
Runs residual | 0.0169869928169 |
Runs probability | 0.0830368183312 |
Amino acid sequence | MTDTSFCFLRVLKSFFLGCVRWLTPVIPVLWEAEAGGSPEVRSSRPAWPTW |
Secondary structure | LLLLLHHHHHHHHHHHHLLLLLLLLLLLEEEEELLLLLEEELLLLLLLLLL |
PRMN | LLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLL |
PiMo | iiiiiiiiiiiiiTTTTTTTTTTTTTTTTTToooooooooooooooooooo |