NONHSAT101151

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT101151

Source

NONCODE4.0

Same with

,

Classification

sense

Length

668 nt

Genomic location

chr5-:40777118..40798261

Exon number

2

Exons

40777118..40777688,40798165..40798261

Genome context

Sequence
000001 GCGACAGCCG AGAAGCAGAA ACACGACGGG CGGGTGAAGA TCGGCCACTA CATTCTGGGT GACACGCTGG GGGTCGGCAC 000080
000081 CTTCGGCAAA GTGAAGGTTG GCAAACATGA ATTGACTGGG CATAAAGTAG CTGTGAAGAT ACTCAATCGA CAGAAGATTC 000160
000161 GGAGCCTTGA TGTGGTAGGA AAAATCCGCA GAGAAATTCA GAACCTCAAG CTTTTCAGGC ATCCTCATAT AATTAAACTG 000240
000241 TAAGCTCTGT TTATATTAAA TATAGTCCAG TCATCTTTTC ATCTTTTTTG TTAACCTACT TAATGTGACA AGTGAGAAAA 000320
000321 ATGACTGACA CTTCTTTTTG TTTCCTAAGG GTTTTGAAAA GTTTCTTCCT Aggctgtgtg cggtggctca cacctgtaat 000400
000401 tccagtactt tgggaggctg aggcaggcgg atcacctgag gtcaggagtt cgagaccagc ctggccaaca tggtgaaacc 000480
000481 ctgtctccag taaaaataca aaaattagct gggcatggtg gtgggcgcct gtaataccag ctactcggga ggctaaggca 000560
000561 ggagaatggc ttgaacctgg gaggcggagg ttgcagtgag ctgagatcgt gccattgcac tccagcttgg gcaacaaaag 000640
000641 cgaaactctg tcccaaaaaa aaataaaa
[back to top]

Predicted Small Protein

Name NONHSAT101151_smProtein_320:475
Length 52
Molecular weight 5828.7427
Aromaticity 0.156862745098
Instability index 67.4254901961
Isoelectric point 7.82391357422
Runs 7
Runs residual 0.0169869928169
Runs probability 0.0830368183312
Amino acid sequence MTDTSFCFLRVLKSFFLGCVRWLTPVIPVLWEAEAGGSPEVRSSRPAWPTW
Secondary structure LLLLLHHHHHHHHHHHHLLLLLLLLLLLEEEEELLLLLEEELLLLLLLLLL
PRMN LLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLL
PiMo iiiiiiiiiiiiiTTTTTTTTTTTTTTTTTToooooooooooooooooooo