NONHSAT101190

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT101190

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

4581 nt

Genomic location

chr5+:42153042..42175444

Exon number

7

Exons

42153042..42153776,42154408..42157540,42157823..42157966,42159126..42159155,42159327..42159548,42168564..42168689,42175254..42175444

Genome context

Sequence
000001 ACTCCTATTC AACTTCACCC ACAGCGAATT AAAAGGCTTT CAGACAAACA ACAGTGATGG CACAGGAACA GCAGCCTATC 000080
000081 GGATGCTGAG GAGTGGTGGG GTGGCAGATA GGTAAGGCAA GGCAACTTCT CAAGTGTCAT CAAAGTTTAA GTGAAACAAA 000160
000161 ACATACTGGA GGCACTGTTT CATGAACATT CAAATCAATT ACATTCAATG AAATCTAATT ATTGTGCACT GCTATTTGTA 000240
000241 TTCTAAGTGA TTTCTTGAGG CGAAAAGAAC AGAACCTTCT CAATTAGAAA AGAGCTAACA AATATTTTAT TAAACACCGA 000320
000321 ATGAGAATTG CACTGTGGTA GGCCACAAAG TTCCAAAGAA CAAATAAGAT GGCTTAGGGT TTTGAGAAAC TTGGATACTA 000400
000401 TGAGCTGCCA ATGAAAGAGA AGGTTGGCAT CCCTACCCTG TCATTGGGAA ACTTGAGTAC ACTGCAGTCC TCTTATTAAG 000480
000481 ACATTTCTGA GAAGAAAAAA AATAAAATGT AGGTGTTCTG AGGTGCTGTA GAGATGGAAA ATAAAATGCT CAGATGCCTC 000560
000561 CATTCCCTTC TGTGCCTACA GTAGACGTGG GGTTTCAAAC AAGACTTTTT TTCTTGCTTT TCCAGAACTC TTTCCATTTC 000640
000641 GTAAATTCAG CACTGTCAGT TCTATGGAGG CATTAGCTGC ATCCAGACAA CTTCATTCCT GGAAATATGT ACTAACAACT 000720
000721 CCCTTTGTTG GCTTTaatat ggtaaaactc catctctaca aaaacaacga caacaacaac aaaattagcc aggcatggtg 000800
000801 atgtagtccc aactacttgg gaggctgaag tgggaggatt gcttgagccg aggaggtcaa gacagcagtg agccatgata 000880
000881 acgccagtgc actccagcct gggccacaaa gtgagagacc tcttccaaaa aaaaaaaaaa ttgttttctt attattgacg 000960
000961 tcttattata gacacaagtc ttatcaaata tgtgttttgt aaatatttcc tcccttctat ggctcgtgtt ttcattttca 001040
001041 tttttgtaat attgtctttt gaatagtaga aatttttaat ttcaataaag tagaatttac aaacattttc ttttaaaggt 001120
001121 tatgctttca atgtcatatc taagaaatcc tagccaaagg ttacaaataa tttctcctgt atttttataa aagtcttata 001200
001201 attttaagtt ttatgtttag ttctatgatg catttgagta aatttttgta tatttttctt taatttcctt taatttatag 001280
001281 tagtctcctt ggtttttagt tttgcttttt atgatattga ctttttttta gaagtgaaca gaccacttgt cttgtataat 001360
001361 atccaacaag ttggatgtgt ctaactggtt tctcatgctt aggttcaggt taaacatttc tggcaagatt aatttacaga 001440
001441 agttttgtac tcaatgcaca acaacaaagg ACattaaaaa gaactcacac tgatattttt aattcaaatt tgatattaca 001520
001521 tggtttcttc tttagctatt caaatgttat atttatattt ctttatctct cacagtgaaa cccttggttc ctcttagtaa 001600
001601 tatacttatt tcacatacta taaatcaaac agtttcagaa ttaaaacaat attacagcct gcaataaact gttatgtaca 001680
001681 gcttaatatt tctttacagt tcttttttct tttaTAATGG ACCCTATTAA GATAAAACAA ATGTTTTCAA AAGTATGTGA 001760
001761 ATTAATTCCT CTCCTTGCAT AGCTATattt aatattcaat ttaatatgaa tattcaattt aatgaattta atattcagtt 001840
001841 taatattcaa tttaatgaat ttaatattca atttaatatt caatttaata tgaatttata ttcaatttaa tatGAAGTCA 001920
001921 GATTCATTTT TTATCTTCAT ATTCAATTTT AGAGTTTGCT TTTCTAACCT TAGTTTTATT TTTAATAATT CAGTTTTATT 002000
002001 GTTTCAATAT GTACAGCATT TGCATAACTC AAATTACAAA TAATATGTGA AACATTTTAG cttttcaccc attcccattt 002080
002081 ctacccaatg gataaccatt ttcattagtt tctatatgtc ctttctactt tcgtatttgt tttttgtttt cacaaaagta 002160
002161 agcaaatttg tgatatctat tctcattcct ccttctttct tatgcacatg tagcatagca tatacaccct tctgcacttt 002240
002241 gatttttttt ttttttcagt taaaaatacg ttctggaaat cactccatga cagttcatgg acatgtcact cattcttttt 002320
002321 tacaacttca taaaaattca ttttgtggat aaaccacagt ttatcctttc acataaatag acatgtattt gaaagataca 002400
002401 aaaatagaca gtaacttgct attactaaca atgtaacatt gaatagcttc cattttgcct acatatagag agatatgtct 002480
002481 tcaagatgaa ttcctagaag tgaggttgct aggtcaaagg gtgattgcat atatggttct aacagttatt gttacattaa 002560
002561 tctctttaga ggctatacca ttttgcactc tcaccagcaa cataatagag caccttttGC TTTTCAGAAA AAAATATTTA 002640
002641 AATTAGATGC CCATGGAAGA CTCATCAATA TGGGAGATAA TTTCTGATAC AATGTATGCA TTTAtttatt tatttgtttg 002720
002721 tttgtttgtt tgagatggag tctctttctg ttgcccagac tggagtacag tggtgtgatc tcacctcact gcaacctctg 002800
002801 cctcctgggt tcaagccatt ctcctgcctc agccccccga gtagctggga ttacagctgt gcaccaccaa gactggctaa 002880
002881 tttttgtatt tttagtagag atggggtttt gccatgttgg ccaggctgat cttgaactcc tgacctcaag tgatccaccc 002960
002961 acctcagcct cccgaagcgc tgggattaca ggcataagtc aacacacccT ACCTGAAATG TATGCATTTA AAGCAGCTGT 003040
003041 AAATTGCTAG TAGGTCATAC ATAACTGAAT ATAGAGGTGT GGAAAGATAA GAAAGAAAAG CTGTAAATAT GTGAAAGGAG 003120
003121 ACAATGCCTG TGGATGTGGT TATTATCCTA GGAGCTGACT TCCCACTCTT TTCCTGCCTT TTCACCTTCC CAGGCCAACT 003200
003201 GCCTCTTATC CTTTCATCAA AACAATGGAT TTGTGAGATG GGGAGGTGCA TTTTACTCCT GAGCACCCCT TAGCTTGCCT 003280
003281 GGCTTATGAG TGCTGTCTTT GATGTTCCCA AAGGTTATAA ATCATTTATA AGATCCCTTA ATCAGAACCA GTGTCTGAAT 003360
003361 TCTTTACTTA CCAATTCATC CCATGAACAA CTTTCTGGAA ATAGCTAGAG GGGCAGAGAG GAATCAGGCT GCATTCTTTT 003440
003441 TTAAGTGAGT GCCAACTATT CAGATTAAAG AGTATGGAAC TCTCTCTTTC TAGTACAATG ACATAGAGGA AAGAAGGTCT 003520
003521 GGGTACACAG CTGCCCTCTT AGGCAAGTGC TGGGGAGTTT GTTTCCACAT TATCTCTTAA CCCTTCTCAG TTTTGTTCCC 003600
003601 AGGGGAAGAG GACCAAGTTA GCTGATAAAT GAGACAGAAA AATTTCATTG ACCGGGCTGG GCATTCAGGA TGTAGGGTTT 003680
003681 TTGCTTTGTA ACTCTAGTTT CCATCACTCT TGGTCTTCCC AGAAGTTGCT TGATTTCAGA CAGAGTATTT TCTTGTTGCT 003760
003761 GAGAAAAGAA ACTGAAATCT TGCTCTGCCC CCAATAGGAA TAAACATTAT AGTCTGCAGT CAGAAACAAA GCACATTGCA 003840
003841 CCTGGAAAGA ACAAAAATCA AAATGAGTAT AATGTTTTAC TTGTCTTTTC ATATGGCCTA CTTCTCCCTT GCAGTAAATG 003920
003921 CCTCAAGTTG CAAATTTCCA GGTTCTACAT TCACGATTCA GGGTGGGCAG GGTAATAAAA GTCTCTGCAC AGTTAGAGAC 004000
004001 TCTGCAAGGC TATACCATTA ATTCCTTGGT CCTGAGATAA CAcatcccga tgtataatct caattaattg actttcttag 004080
004081 aatctctcat attcattccc tgctcttcat cgttctttgc tatatccctt atggaagcca ccatcatgtc ttacctggat 004160
004161 attgcaatag tcttaagagt agtttctttc tattctcctt cttgtttagc tatccacatt cttcctccaa accatccatt 004240
004241 cataatgcag ccagaatgat gtctCCCCCA TTGATGTGCA GACTCTGAGC CCCCTCCTCT CTGGAGCTTC CAGCTGCTAC 004320
004321 AGCTTCCTCA AGTTAGCAAG ACCATCTTGT TTTGCTGATT TCAGCTTGCT GGGTTTCAGT ACCGATAGTC ccattttgga 004400
004401 ggctagaaag ttcaaggtcg agaggctgca tctgctgagg gcctttttgc tggtgaaaac attctggaga gtcctgaggc 004480
004481 attgcagggc atcaGTCTCT TCCCCGTGAG GACTTTGCAT AAAAACTGTT GAATTGAGTA AGACTTCACC TTTTTTTGTA 004560
004561 ACACAGAGCT CTGACGCAAA G
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Predicted Small Protein

Name NONHSAT101190_smProtein_2900:3049
Length 50
Molecular weight 5111.7195
Aromaticity 0.0612244897959
Instability index 44.4244897959
Isoelectric point 5.30401611328
Runs 9
Runs residual 0.0216216216216
Runs probability 0.0268503797916
Amino acid sequence MGFCHVGQADLELLTSSDPPTSASRSAGITGISQHTLPEMYAFKAAVNC
Secondary structure LLEEEELLLLHHHHLLLLLLLLLLLLLLLLEELLLLLHHHHHHHHHHLL
PRMN -
PiMo -