NONHSAT101306

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT101306

Source

NONCODE4.0

Same with

,

Classification

sense

Length

591 nt

Genomic location

chr5-:43293836..43294954

Exon number

2

Exons

43293836..43294264,43294793..43294954

Genome context

Sequence
000001 ATTAGAAGAC ACCTACTTTG ATAGAGATGT GGAGAAGGCA TTTATGAAGG CTAGCTCTGA ACTCTTCAGT CAGAAAACAA 000080
000081 AGGCATCTTT ACTTGTATCA AATCAAAATG GAAATATGTA CACATCTTCA GTATATGGTT CCCTTGCATC TGTTCTAGCA 000160
000161 CAGTACTCAC CTCAGCAATT AGCAGGGAAG AGAATTGGAG TGTTTTCTTA TGGTTCTGGT TTGGCTGCCA CTCTGTACTC 000240
000241 TCTTAAAGTC ACACAAGATG CTACACCGGG TAAGTGCTGA ATCTTTCAAC AAGAATGTAT TGAGAACTGA GTccaggcac 000320
000321 agtggctcac acccgtaatc ccagcagttt gggaggccga ggcgggcaga tcacctgagg tcaggagttc gagaccagtc 000400
000401 tggctaacat ggctgaaacc ccatctctac taaaaataca aaaattagcc aggtgaggtg gtgcatgcct gtagtcctag 000480
000481 ctacttggga ggctgaagta ggagaatcac ttgaatccag gagagggagg ttgtggtgag ccaagatcac accactgtgc 000560
000561 tccagcctgg gtgacagagc gagactctgt c
[back to top]

Predicted Small Protein

Name NONHSAT101306_smProtein_209:337
Length 43
Molecular weight 4840.6567
Aromaticity 0.047619047619
Instability index 68.8928571429
Isoelectric point 10.2951049805
Runs 7
Runs residual 0.00949367088608
Runs probability 0.0357458298634
Amino acid sequence MVLVWLPLCTLLKSHKMLHRVSAESFNKNVLRTESRHSGSHP
Secondary structure LEEEELLHHHHHHHHHHHHHHHHHHHLLLHHHHHHLLLLLLL
PRMN -
PiMo -