NONHSAT101321
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT101321 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
1040 nt |
Genomic location |
chr5-:43573287..43603332 |
Exon number |
3 |
Exons |
43573287..43576037,43583569..43583668,43602880..43603332 |
Genome context |
|
Sequence |
000001 AGCTTTCTTC CCGCCAGGCC CCCTCCACCC GATCGCCGCG CGCTCTCCGA ACCAAAAGGC GACCTCACGA AATGCCCCTT 000080
000081 TGAGCTCAAA GGCTAGTTAC CCCCAGGGGC CCTTCCACTC TCGGGGACAG GCGAAACCTC TTTGTCTCTG CCTCGGCCTG 000160 000161 CGGCCCCCAG CCCAGCCTCC GCGCTTTCCC TCCGCCAGTC CTTGTCAATC AAACCTGGTG CCAAACGCGG CAGCTGAAGT 000240 000241 TTTCAGGGAC ACATTTGCTT CTCCCCTTGA AGAACCAGTT ACAAAGCGTG ATGTCCTCTC TGGGGTCCCA TCAGAACAAA 000320 000321 GAAACAGGTC TAAAGACCCT CATTCCAGAG AGCATCCTGC CCCATATCCA GAATGAAATC CATGCTCAGA GATGCCAAGA 000400 000401 AGAATCTAGA CAGACAGGCC TTTCTAGGCT GTACAAGAAG CATGATGCCA GCATCTGCTT CTGGTGACAA CCTCAAGAAG 000480 000481 TTTACAATTG GCCGCGTGCG GTGGCTCATG CCTGTAATGC CAGCACTTCG GGAGGCGGAG ACAGATGGAT CATTTGAGGT 000560 000561 CAGGAGTTCG AGACCAGGCT GGCCAACATG GTGAAACCCC ATCTCTACTA AAAATACAAA AATTAGCTGG GCATGGTGGC 000640 000641 ATGTGTCTGG AATCCCTGCT ACTCAGGAGG CTGAGGCAAG AGGATCACTT GGAACTTGGG AGGCAGAGGT TGCTGTGAGC 000720 000721 TGAGATCACA CCACTGTACT CCAGCCTGGG CAACAGAGTG ATACTCTATC TCAAAAAAAA AAGAAAGAAA GAAAGAAAAG 000800 000801 AAAAAGAAGC TTACAATCAT GGTGGAAGGC GAAGAGGAGG AGCAGGCATA TCACATGGCC AAAAAGGGAG CAAGAGAAAG 000880 000881 GTGAGAAAGA CACTAGACTC TTTTTAAAAC CAGCTCTCAC ATGAGCTAAT GGAATAAGAA CTCACTCATT ACCACAAGGA 000960 000961 CAGAACCCAG CCATTCATGA GGGACCTGCC ACCATGACCC AAAAACCTCC TACTTGACCC AACCTCCAAC ACTGGGGATA 001040 |
Predicted Small Protein
Name | NONHSAT101321_smProtein_290:466 |
Length | 59 |
Molecular weight | 6676.4926 |
Aromaticity | 0.051724137931 |
Instability index | 66.825862069 |
Isoelectric point | 7.86566162109 |
Runs | 9 |
Runs residual | 0.0014209928003 |
Runs probability | 0.0220023945515 |
Amino acid sequence | MSSLGSHQNKETGLKTLIPESILPHIQNEIHAQRCQEESRQTGLSRLYKKHDASICFW |
Secondary structure | LLLLLLLLLLLLLLEEELLHHHHHHHHHHHHHHHHHHHHHLLLHHHHHHLLLLLEEEL |
PRMN | - |
PiMo | - |