NONHSAT101360

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT101360

Source

NONCODE4.0

Same with

,

Classification

intronic(AS)

Length

2068 nt

Genomic location

chr5+:45558021..45560088

Exon number

1

Exons

45558021..45560088

Genome context

Sequence
000001 aatggactct aggtgtccaa gtgaaaggca gagtcacata tctctcatgt gaatcaaaag ctagaaatga ttgagcttag 000080
000081 tgaggaaggc atattgaaag caaaaacaga ccaaaagctg ggcctcttat gccaaacact gagccaagtt gtgaatgcaa 000160
000161 aggaaaaatc cttgaaggat atcaaaaact ctattccagt gaacacagaa ttaatttaaa aaaaaaaaag agagagagag 000240
000241 agagagaaac agtcatattt ctgatatgga gaaagtttga gtgttctgga tagaatcaaa ctaaccatga tgttccctga 000320
000321 gccaaatcct aacccagagt gaggtgctaa ctctctttaa ttctgtgaag cctgacagag gtgaggatgc tgcagaagaa 000400
000401 aagtctgacg ttagcagagg ttggtttgtg aggtttaagg aaagaggctg tttccataac ataaaagtgt aagataaagc 000480
000481 agcagatgtt gatgtagaaa ctgcagcaag ttatccaaaa gatctagcta agataattga tgaaggtggc tacactaaaa 000560
000561 aatagatttt caatgtaaat gaaagaggct taaattgaaa tattggaaaa atatgccatt ttgaactttg ataggtagag 000640
000641 agaaatcaat gtctggcttt aaatcttcaa aggacaggct tactctcttt ttaggagctt atgcaactgg tgaacctaaa 000720
000721 tttaagcaaa tgctcattgc tcattcctaa aatcaaaggg cccttaaaaa ttatgctcaa tctactctgc ctgtgctcta 000800
000801 caagtggaat ttaaaaatag gcctggatga cagcacatct gtgtctatag tatttattta tttatttaga tacaggatct 000880
000881 tgctctgtca cccaggctag agtgtggtgg cattatcata gcttataaga tcactgcagt catcccatct tggcctccca 000960
000961 agtagttagg attataggta cataccacca catccagcta tttttttttt tttttttttt tttttaggga tgggatcttg 001040
001041 ctagattgct caggctggtc tcaaactcct ggcctcaaat ggtcctccca ccttggtctc caaaactcct gggattacag 001120
001121 gtatgagcca ccacacccag cctacaccca gcctacagca agcctatggt ttgctgcata ttttaagccc accgttgaga 001200
001201 ccgactgttc agaaaaaaaa gattccctaa cacggctcac tgctcactga caatacatct agtcgcccaa gagctctgat 001280
001281 ggatatgtac aaggaaatta atgctgtttt catgactgat atcaaggcat ccattctgca gcccatgctt caaagagtat 001360
001361 tttcaacttt caagtctcat tatttaagaa atatatttcc taagtctata gctgccatag atagtgattc ctctgctgga 001440
001441 tctgggcaaa ataaatttta aaccttctgg aaagaattca ccatccaaga tgtcattaag aacatctgtg attcatggga 001520
001521 tgtcaaaata tcaacattac acaagtctgg aagaagtatt ccaactttca tggatgactg tgaggggttc aagactttag 001600
001601 tggaggaagt aactacacat gtggtagaaa tagcaagaga actagaatta gaaatggagc ctgaagatgt aactgaattg 001680
001681 ctgcaatatc atgatgcaac ttgagagcag agagtcattt cttaagatgg aatctactca tagtgaagat gctgtgaaca 001760
001761 ttgttgaaat gagaacatga agattttgaa tatttcataa acttagttgc aaaagcagca gcactggcag tgtttgagaa 001840
001841 tactgacttc aattttgaga gaaattccag tgtgggtaaa atgtatcaaa taacattatg tgcttcagag aaatatttta 001920
001921 tgaaaaaaag tcaatcaatg tgggaaacct cattgttgtc ttattttaag aaattgccac agccattcca accttcggta 002000
002001 aacactgccc tgataagcca gttgccatca atattgaggc ggaacttaga ccagcaaaaa gatcagga
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Predicted Small Protein

Name NONHSAT101360_smProtein_128:292
Length 55
Molecular weight 6518.5296
Aromaticity 0.0925925925926
Instability index 55.2981481481
Isoelectric point 9.36822509766
Runs 11
Runs residual 0.0410117434508
Runs probability 0.0365980954216
Amino acid sequence MPNTEPSCECKGKILEGYQKLYSSEHRINLKKKKRERERETVIFLIWRKFECSG
Secondary structure LLLLLLLLLLLLHHHHHHHHHLLLLLEELHHHLLLHHHHLEEEEEEEEEEEELL
PRMN -
PiMo -