NONHSAT101360
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT101360 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS) |
Length |
2068 nt |
Genomic location |
chr5+:45558021..45560088 |
Exon number |
1 |
Exons |
45558021..45560088 |
Genome context |
|
Sequence |
000001 aatggactct aggtgtccaa gtgaaaggca gagtcacata tctctcatgt gaatcaaaag ctagaaatga ttgagcttag 000080
000081 tgaggaaggc atattgaaag caaaaacaga ccaaaagctg ggcctcttat gccaaacact gagccaagtt gtgaatgcaa 000160 000161 aggaaaaatc cttgaaggat atcaaaaact ctattccagt gaacacagaa ttaatttaaa aaaaaaaaag agagagagag 000240 000241 agagagaaac agtcatattt ctgatatgga gaaagtttga gtgttctgga tagaatcaaa ctaaccatga tgttccctga 000320 000321 gccaaatcct aacccagagt gaggtgctaa ctctctttaa ttctgtgaag cctgacagag gtgaggatgc tgcagaagaa 000400 000401 aagtctgacg ttagcagagg ttggtttgtg aggtttaagg aaagaggctg tttccataac ataaaagtgt aagataaagc 000480 000481 agcagatgtt gatgtagaaa ctgcagcaag ttatccaaaa gatctagcta agataattga tgaaggtggc tacactaaaa 000560 000561 aatagatttt caatgtaaat gaaagaggct taaattgaaa tattggaaaa atatgccatt ttgaactttg ataggtagag 000640 000641 agaaatcaat gtctggcttt aaatcttcaa aggacaggct tactctcttt ttaggagctt atgcaactgg tgaacctaaa 000720 000721 tttaagcaaa tgctcattgc tcattcctaa aatcaaaggg cccttaaaaa ttatgctcaa tctactctgc ctgtgctcta 000800 000801 caagtggaat ttaaaaatag gcctggatga cagcacatct gtgtctatag tatttattta tttatttaga tacaggatct 000880 000881 tgctctgtca cccaggctag agtgtggtgg cattatcata gcttataaga tcactgcagt catcccatct tggcctccca 000960 000961 agtagttagg attataggta cataccacca catccagcta tttttttttt tttttttttt tttttaggga tgggatcttg 001040 001041 ctagattgct caggctggtc tcaaactcct ggcctcaaat ggtcctccca ccttggtctc caaaactcct gggattacag 001120 001121 gtatgagcca ccacacccag cctacaccca gcctacagca agcctatggt ttgctgcata ttttaagccc accgttgaga 001200 001201 ccgactgttc agaaaaaaaa gattccctaa cacggctcac tgctcactga caatacatct agtcgcccaa gagctctgat 001280 001281 ggatatgtac aaggaaatta atgctgtttt catgactgat atcaaggcat ccattctgca gcccatgctt caaagagtat 001360 001361 tttcaacttt caagtctcat tatttaagaa atatatttcc taagtctata gctgccatag atagtgattc ctctgctgga 001440 001441 tctgggcaaa ataaatttta aaccttctgg aaagaattca ccatccaaga tgtcattaag aacatctgtg attcatggga 001520 001521 tgtcaaaata tcaacattac acaagtctgg aagaagtatt ccaactttca tggatgactg tgaggggttc aagactttag 001600 001601 tggaggaagt aactacacat gtggtagaaa tagcaagaga actagaatta gaaatggagc ctgaagatgt aactgaattg 001680 001681 ctgcaatatc atgatgcaac ttgagagcag agagtcattt cttaagatgg aatctactca tagtgaagat gctgtgaaca 001760 001761 ttgttgaaat gagaacatga agattttgaa tatttcataa acttagttgc aaaagcagca gcactggcag tgtttgagaa 001840 001841 tactgacttc aattttgaga gaaattccag tgtgggtaaa atgtatcaaa taacattatg tgcttcagag aaatatttta 001920 001921 tgaaaaaaag tcaatcaatg tgggaaacct cattgttgtc ttattttaag aaattgccac agccattcca accttcggta 002000 002001 aacactgccc tgataagcca gttgccatca atattgaggc ggaacttaga ccagcaaaaa gatcagga |
Predicted Small Protein
Name | NONHSAT101360_smProtein_128:292 |
Length | 55 |
Molecular weight | 6518.5296 |
Aromaticity | 0.0925925925926 |
Instability index | 55.2981481481 |
Isoelectric point | 9.36822509766 |
Runs | 11 |
Runs residual | 0.0410117434508 |
Runs probability | 0.0365980954216 |
Amino acid sequence | MPNTEPSCECKGKILEGYQKLYSSEHRINLKKKKRERERETVIFLIWRKFECSG |
Secondary structure | LLLLLLLLLLLLHHHHHHHHHLLLLLEELHHHLLLHHHHLEEEEEEEEEEEELL |
PRMN | - |
PiMo | - |