NONHSAT101361

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT101361

Source

NONCODE4.0

Same with

,

Classification

intronic(AS)

Length

2023 nt

Genomic location

chr5+:45574692..45576714

Exon number

1

Exons

45574692..45576714

Genome context

Sequence
000001 aagagtcaca catctctcac gttaaatcaa aagttagaaa tgattgagct tagtgacaaa ggcatgttga aggccaaaac 000080
000081 agaccaaaat ctacgtttct tatgccaaac agttagccaa gttgtgaatg caaaggaaaa gttcttgaag gaaattaaaa 000160
000161 aggctacttc agtgaacaca ggagtgataa gaaagagaaa cagccttgct gttgatgtgg agaaagtttg agtggtctgg 000240
000241 atagaagatc aaatcaccca cagcattccc taagccaagt cctaatccag accaaggcag ttactccgtt caattcagtg 000320
000321 aaggctgaga gaaatgagga agctacagaa gaaaagtttg cagccagcag agtttggttc ttaagatcta aggaaagaag 000400
000401 taatgtccag aacagaaaag tgcaaggtga tgcagcaact ggtaaggtag aagcttcagc aagttattca ggtatagcta 000480
000481 agataattca tgaaggtgaa cgaaggtggc tacactaaac aacatatttt caatgtagac caaacatcct tctattggag 000560
000561 gaaaatgcca tctaggaatt taatagctaa agatgaaaaa tcaatgcctg tttaaatctt caaagaacag tctgactctc 000640
000641 tttttaggag ctaatgtagc tggtgacttt aagttgaagc caatgttcat tgactatcct gaaaattcta aggtccttat 000720
000721 tctcagcaaa ctatcgcaag gacaaaaaac caaacaccac atgttctcac tcataattgg gaactgaaca atgaaacaca 000800
000801 tggacacagg aaggggaaca tcacacacca gggactgttg tggtgggggc ggggagggat agcattagga gatgtaccta 000880
000881 atgctaaatg acgagttaat gggtgcagca caccaacatg gcacatgtat gcatatgtaa caaacctgca cgttgcgcac 000960
000961 atgtacccta aaacttaaag tataataaaa aaaaggaaat aagctcaatc tactctgcct gtgctctata aataaaataa 001040
001041 caaagcttgg atgtcagcac atttgtttac aacatagttt accaaatact ttaagcccac tcttgagacc tactgctcag 001120
001121 aaaaaaagat ttctttcaaa atatcactgc tcattgacaa tgcaccaagt cactcacata agagctctga tgaagatgta 001200
001201 caaggagatt aatttaatgc tgttttcatg actgctaaca cagcatccat tctgcagccc atgcttcaaa gagtattttc 001280
001281 aactttcaag tgttatgatt taagaaatat atttttatat atttatgaag tatagctgcc atagatggtg attcctctga 001360
001361 taaatctggg caaaataaat tgtaaaccta ggattcacca tcctagatgt cattaagaac actgttgatt gatgggagga 001440
001441 ggtcaaaata taaacattaa aagaaatttg gaagaagttg attctaacca ccatggatga ccttgccgga ttcaagaatt 001520
001521 caatggaaga agtaactgca gatgtgttgg aaataataaa agaactagaa ttagaagtgg cgcctcaaga agtgactaca 001600
001601 ttgctgcaat ctcatgacaa aagttgaatg aatgagaagt tgcttataga taagtgaagt ggtttcttga gatggaatct 001680
001681 acacctgata aagatgctat gaatattgtt gaactggcaa caaaagattt ggactattac ataaacttat ttaatgaagc 001760
001761 agaagcagag gcagtgttta agaagactga cttcatttag aagttctacc atgtgtaaaa tgccatgaaa tagcatcata 001840
001841 agctacagat acatttttct gaaggaagag taaattgatg tggccaactt ccttgttgtc ctattctaac aaattgccac 001920
001921 agtcacccca acttacagca accacccttc tggtcagaca gcagtcatca acatcaaagc aagacctccc accagcaaaa 002000
002001 agtatcacta gttgaaggct cag
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Predicted Small Protein

Name NONHSAT101361_smProtein_1877:2014
Length 46
Molecular weight 4931.5757
Aromaticity 0.0444444444444
Instability index 90.5
Isoelectric point 9.99615478516
Runs 6
Runs residual 0.0289141414141
Runs probability 0.0229935818171
Amino acid sequence MWPTSLLSYSNKLPQSPQLTATTLLVRQQSSTSKQDLPPAKSITS
Secondary structure LLLLHHHHLLLLLLLLLLLLLEEEEHHHLLLLLLLLLLLLLLLLL
PRMN -
PiMo -