NONHSAT101427
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT101427 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
991 nt |
Genomic location |
chr5-:52514226..52547418 |
Exon number |
3 |
Exons |
52514226..52514749,52543829..52544029,52547153..52547418 |
Genome context |
|
Sequence |
000001 GCCAGGCTGG TCTTGAAGTC CTGACCTCAG GTGATTCGCC TGCCTAGGCC TCCCAAAGTG AGGGGGTTAT AGGCGGGATC 000080
000081 CACCATGCCC AGCCTAAACT ATGCTTTTGA TTGTTATTTT AGAGTGTACT TTGTCTACTT ATTGAAAAAA GAAAAAAAAG 000160 000161 TGAACTGTAA AACAGCCTCA AGCAGGTCCT TCAGGAGGTA TCCAGAAGAA GGCATTGTCA TAGGAGATGA CAGCTCCATG 000240 000241 CGTGTTATTG CTCCTGAAGA CCTTCCTGCC ATTTCTATGA AAGGTTTTTT ACTAAGTGAT TGTCCTTTTT CTTTTGTGGA 000320 000321 TCAGGTGCAG AGGAATCCAA GGTGTAGGGA ATGAAAGAGC CACAAGATGT AAGAAACCTC AGTTCCTCAA TGTAGACATG 000400 000401 GAAGAAAGCT TCCGGGAGCA GGCTCACTGG ATTTGGTCAC ATAATGATCA CAGAATAAAC TCTTGTGAAT CAGTGAAACT 000480 000481 ACAAATGGTA CTGCAGATGG AACCTCGGAT GACTTCAACC AGCACCTATT ATCAAGGACC CCTAGACTAG CCTGCCAGCC 000560 000561 CATACCCAGA TATTGACACC CAAACCACCT CTCATGAGGA AACCTCAGCT GCAGGGACCC TTCTATGCCC CTACTCAGCA 000640 000641 GGAAGCAGTT TCAGCGGTCA TCGTCCCACA CCCAACAGCA GTTGGGCTCT CCTGTTGAGA GGGGAGACTG AGGGGTAGAG 000720 000721 TTGGTGGGAC TTCCTGGGCC GATTGAAGGA CTTTTGCAAA AGACCCCTGT GACTCAGGGT TTTGAGTTCT TAACCATTCG 000800 000801 AGTGAAGGAT TCAAAATTAA CCACTCTGAG GGAAGATTGA AAAAAGAACC ACTCTCAATG GGCAAAAAGA AAGAAAGGGG 000880 000881 AGGGGGTAAC ATAGGGATAT AAGCCCTAGC CATCCGAGCC AGCAACAGCA ACCCTTCTGG GTCCCCATCC ACCACGTGGA 000960 000961 AGCTTTCCCT TCACTTTGTT CAATAAACTG C |
Predicted Small Protein
Name | NONHSAT101427_smProtein_593:697 |
Length | 35 |
Molecular weight | 3622.1787 |
Aromaticity | 0.0588235294118 |
Instability index | 66.9297058824 |
Isoelectric point | 7.97735595703 |
Runs | 6 |
Runs residual | 0.00967982129561 |
Runs probability | 0.0459724430314 |
Amino acid sequence | MRKPQLQGPFYAPTQQEAVSAVIVPHPTAVGLSC |
Secondary structure | LLLLLLLLLLLLLLHHHHHEEEEELLLLEEELLL |
PRMN | - |
PiMo | - |