NONHSAT101522
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT101522 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
1012 nt |
Genomic location |
chr5-:55286238..55286707 |
Exon number |
2 |
Exons |
55286238..55286250,55286289..55286707 |
Genome context |
|
Sequence |
000001 ATAGCATTAG GAGATATACC TAATGTAAAT TGACTAGTTA ACGGGTGCAG CACACCAACA TGGCACATGT ATCATATGTA 000080
000081 ACCTGCATGT TGTGCACATG TACCCTAGAA CTTAAAGTAT AATAAACAAA AAAAGTGGGT GGGCATTTAT GTGTATATGT 000160 000161 GTTCATGAGC ATGTACCTAT GGTGTATTGT TTTTAGACCT CTTAAATTGA TAAGACTCAG AGACAGAATA TCTAAGAAGA 000240 000241 TGAAATGTAA CTGGAATTAA AAGAAAGATC CAAGCCAAAA TTCTTGAAAT TATTTTGTTT GAAGGTAGTA GTTGAAGTCA 000320 000321 TGTCTTCAAA GAAGTTGGTA TTTAAAAAGA AAAGTCGATG CCCAGTACTT TATCTTTGGG TACCTTCATA GCCTAGAGAT 000400 000401 AAAAGCTAGC AGAGAATTCA ACTACATTAT CTGACAATGA CCATGAGCCC CAAATATCCC CCGGGGGCTT AGAGCCTCCC 000480 000481 AGTGAAAAAC ATTTCCGCGA AACAGAAGTC TGAAAAGGTC AGGGCCCAGA CTAAGGCTCT GACGTCTCCC CCCAGAGGAC 000560 000561 AGCTCAGCAC CGGCTCAGGC TAGGCCCTGA CGTGTCCCCC TGAAGACAAA TCATAAGCTC AGACCTCCGG GAAGCCACCG 000640 000641 GAACCACCCA TTTCCTCCCC ATGTTTGTCA AGCCGCCCTC AGGCGTTGAC GACAACCCCT CACCTCAAAA AACTTTTCAT 000720 000721 GGCACGCATA TGGCTGAATA AACTAACAGG AGTCTATAAA AGCGTGGAGA CAGTTCAGGA GGGGGCTCGC ATCTCTCCTT 000800 000801 CACGCGCCCG CCGCCTTACC TGAGGCCGCC ATCCACGCCG GTTGAGTCGC GTTCTGCCGC CTCCCGCCTG TGGTGCCTCC 000880 000881 TGAACTGCGT CCGCCGTCTA GGTAAGTTTA AAGCTCAGGT CGAGACCGGG CCTTTGTTCG GGGCTACCTT GGAGCAGACG 000960 000961 GAGATTCAGC GCGGTGCTTC ACGCTGTGTG TGCCCCTGTG TGCTCAACTC TG |
Predicted Small Protein
Name | NONHSAT101522_smProtein_164:259 |
Length | 32 |
Molecular weight | 3943.8845 |
Aromaticity | 0.129032258065 |
Instability index | 52.0580645161 |
Isoelectric point | 10.5573120117 |
Runs | 6 |
Runs residual | 0.00772849462366 |
Runs probability | 0.0114231878938 |
Amino acid sequence | MSMYLWCIVFRPLKLIRLRDRISKKMKCNWN |
Secondary structure | LLEEEHHHLLLLHHHHHHHHHHHHHHHLLLL |
PRMN | - |
PiMo | - |