NONHSAT101656

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT101656

Source

NONCODE4.0

Same with

,

Classification

sense

Length

696 nt

Genomic location

chr5+:60346203..60448843

Exon number

5

Exons

60346203..60346367,60368952..60369041,60379070..60379156,60394819..60394859,60448531..60448843

Genome context

Sequence
000001 cagattatgg ccaaagtcta aatttgaATA CTGTGCTGAC TGACCCTTTT CTACTCTATT GTTGCGCAAA TGATACTCTT 000080
000081 CAAGGAAGGA TTATGGCAGC CTGAGAAATC AGGAAAGCAT GGCTTGGAAC TGGCCAAAAC AAAATCCAGC AAGATCTCTT 000160
000161 TGAAGGACAA ACTATTCGAG AGAAAAGAAT TGTAGAAGCA GCAAATAAAA AAGAAGTAGA CTATGAAGCA GGGGATATTC 000240
000241 CAACAGAATG GGAAGtttct tacagattct ggatattata ctttgatgtc ttacatttaa gtctttaaac catcttgagt 000320
000321 tcatttttgt atacggcgaa agCTTGGATT AGAAGAACAA GAAAGACTCC ACCTACTATG GAGGAAATAC TAAAGAATGA 000400
000401 AAAACACAGA GAAGAAATCA AAATAAAAAG CCAAGATTTT TATGAAAAAG AAAAACTCCT TAGTAAAGAG ACCAGTGAGG 000480
000481 AACTCCTGCC TCCACCAGTT CAAACTCAAA TTAAAGGCCA TGCCTCTGCT CCATACTTTG GAAAGGAAGA ACCCTCAGTG 000560
000561 GCTCCCAGCA GCACTGGTAA AACCTTTCAG CCAGGATCCT GGATGCCACG AGATGGCAAG AGCCACAATC AATGAATGCA 000640
000641 TTATGGTCAA ATCTTTTCAT GTATATGGAT GTGACTATTT TAACAAATAA AAGAAG
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Predicted Small Protein

Name NONHSAT101656_smProtein_377:634
Length 86
Molecular weight 9696.7671
Aromaticity 0.0705882352941
Instability index 64.3495294118
Isoelectric point 6.29217529297
Runs 10
Runs residual 0.0188948306595
Runs probability 0.0337837837838
Amino acid sequence MEEILKNEKHREEIKIKSQDFYEKEKLLSKETSEELLPPPVQTQIKGHASAPYFGKEEPS
VAPSSTGKTFQPGSWMPRDGKSHNQ
Secondary structure LHHHHLLLLLHHHEEELLLLHHHHHHHLLLLLLLLLLLLLLLLEELLLLLLLLLLLLLLL
LLLLLLLLLLLLLLLLLLLLLLLLL
PRMN -
PiMo -