NONHSAT101656
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT101656 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
696 nt |
Genomic location |
chr5+:60346203..60448843 |
Exon number |
5 |
Exons |
60346203..60346367,60368952..60369041,60379070..60379156,60394819..60394859,60448531..60448843 |
Genome context |
|
Sequence |
000001 cagattatgg ccaaagtcta aatttgaATA CTGTGCTGAC TGACCCTTTT CTACTCTATT GTTGCGCAAA TGATACTCTT 000080
000081 CAAGGAAGGA TTATGGCAGC CTGAGAAATC AGGAAAGCAT GGCTTGGAAC TGGCCAAAAC AAAATCCAGC AAGATCTCTT 000160 000161 TGAAGGACAA ACTATTCGAG AGAAAAGAAT TGTAGAAGCA GCAAATAAAA AAGAAGTAGA CTATGAAGCA GGGGATATTC 000240 000241 CAACAGAATG GGAAGtttct tacagattct ggatattata ctttgatgtc ttacatttaa gtctttaaac catcttgagt 000320 000321 tcatttttgt atacggcgaa agCTTGGATT AGAAGAACAA GAAAGACTCC ACCTACTATG GAGGAAATAC TAAAGAATGA 000400 000401 AAAACACAGA GAAGAAATCA AAATAAAAAG CCAAGATTTT TATGAAAAAG AAAAACTCCT TAGTAAAGAG ACCAGTGAGG 000480 000481 AACTCCTGCC TCCACCAGTT CAAACTCAAA TTAAAGGCCA TGCCTCTGCT CCATACTTTG GAAAGGAAGA ACCCTCAGTG 000560 000561 GCTCCCAGCA GCACTGGTAA AACCTTTCAG CCAGGATCCT GGATGCCACG AGATGGCAAG AGCCACAATC AATGAATGCA 000640 000641 TTATGGTCAA ATCTTTTCAT GTATATGGAT GTGACTATTT TAACAAATAA AAGAAG |
Predicted Small Protein
Name | NONHSAT101656_smProtein_377:634 |
Length | 86 |
Molecular weight | 9696.7671 |
Aromaticity | 0.0705882352941 |
Instability index | 64.3495294118 |
Isoelectric point | 6.29217529297 |
Runs | 10 |
Runs residual | 0.0188948306595 |
Runs probability | 0.0337837837838 |
Amino acid sequence | MEEILKNEKHREEIKIKSQDFYEKEKLLSKETSEELLPPPVQTQIKGHASAPYFGKEEPS VAPSSTGKTFQPGSWMPRDGKSHNQ |
Secondary structure | LHHHHLLLLLHHHEEELLLLHHHHHHHLLLLLLLLLLLLLLLLEELLLLLLLLLLLLLLL LLLLLLLLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |