NONHSAT101675
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT101675 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1272 nt |
Genomic location |
chr5-:60920228..60927234 |
Exon number |
4 |
Exons |
60920228..60921173,60922625..60922760,60923808..60923894,60927148..60927234 |
Genome context |
|
Sequence |
000001 CTGGGACTAT AAGCCTTTCT TTTCACAGGA AACCCTCCTA ATTGGTCTGA TAAACTTTCT GGGACTCAAA ATAGAACCAC 000080
000081 AGCACAGCCT TGCATCCCAG GGATGAAGCA GACTTGATCA TGGTGGATAC GCTTTGTGAT GGACTGCCCA ACAGTTTTAA 000160 000161 ATGTAAATTG AAAGACCCCA GTACTGGTCC AAGCCCTGAA GACTGCACCC AGGAAAGTGG AGGTATGGAC AGAGGCAGCC 000240 000241 GGTGCCTGAG GAAGCTCCAC GGGGCAGGCA AGGCCCCCAC GTCCAGTCTC AGCCCCTCTT TTGGCCACAT GCCGGAGAAG 000320 000321 GAAATTTTGT GCCTTGAATA ATGAATCCCC CTGGAGCCCA CGGTACCTGT ACTTCTCTTT AGTGTCCACT GAGAATAACG 000400 000401 TGTTCGACAT TCAAGTGACA ACACTGGAAA GCATTTCAAA GCCCTGGAGC CCCAGAACGC TGTACACCCC GACGGCTCTT 000480 000481 CTGCCTGCCC TCTCTTTGGC TTCCAAATGC AGCAAGCTCT TTCTTTACTT AAAATGTGTT CATCTTTCAC ACGCATCCTG 000560 000561 GATGTACCAC AGAAAGACAG TACAGATAGG CAGGCTCTTA TTTCTGAAGC TGAGCTGGTC CCGCCCAGCA CAAAGCTTTA 000640 000641 AAGCTGCTAA GGCTCCAGGA TATTATCCAG TTTTTAAAAA TGGAAAAACT GGGAACAGGG AGGCTCAATA TCTTGTCCCA 000720 000721 GGCCCAAACA GGCTTTTCTG GAGTCAGTAT CATTCAACTG GCTCAGGCTG GATTTTCATA AGAAAAGATA ATAAACATTT 000800 000801 ACTAATGTAA TAAAATAGAC ACCTTTTAAG TCACAAGCAG TATCCAAACC TTTGGGACAT TCTATGGTGC TGAACAGCTA 000880 000881 TTTCATAGAG GCTTTATGTT AAGGAGCAAG TGCAGAAAAA AAATCTGAAA ATCTCAGTAA GATGAGAAAA CGAAAGCTTT 000960 000961 ACAAAATGGT AGAAGAAAGT AGTCTCTCAT GCCTGAACTT CCAAATAAGT TTTTGTTTGT TTGTTTTGGG TTTTTAGTTG 001040 001041 AGCATTCTTT CTGGTTTGAA ATAGATTCAG AAGGCTTTTT AAAACAAGTC ACTTTTGGCC AAATATATTA AGGTATAACC 001120 001121 AAATGATACC ATAGATCCAT TTAGAAAACA GAAAGTTCTT TACTGACATG AAAGGATTTC TGAGACATAT TCATAAGTAA 001200 001201 AAAAGCAAAT ATACTACTAT TTGTATGGGA TGAAAAAATA AAAGAAACAT GTATATAAAA AAAAAAAAAA AA |
Predicted Small Protein
Name | NONHSAT101675_smProtein_119:340 |
Length | 74 |
Molecular weight | 7780.807 |
Aromaticity | 0.027397260274 |
Instability index | 63.2479452055 |
Isoelectric point | 6.06732177734 |
Runs | 7 |
Runs residual | 0.0482545293858 |
Runs probability | 0.0224468165645 |
Amino acid sequence | MVDTLCDGLPNSFKCKLKDPSTGPSPEDCTQESGGMDRGSRCLRKLHGAGKAPTSSLSPS FGHMPEKEILCLE |
Secondary structure | LLLLLLLLLLLLLEELLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHLLLLLLLLLLLLL LLLLLLLEEEELL |
PRMN | - |
PiMo | - |