NONHSAT101689
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT101689 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1265 nt |
Genomic location |
chr5-:61028629..61031559 |
Exon number |
2 |
Exons |
61028629..61029573,61031204..61031559 |
Genome context |
|
Sequence |
000001 GCTTTTGGCC AATCTCCATG AGAGAAAGTT CTCAACCTCT GATTGCAAGT TTATTTTGAC CATTTACCAT AACTTCAACT 000080
000081 TCAATGCTCG TCTTGAAGGG CATGACTTGT CATCCTAATA TAATTAGCCC CTCTTCCAGC AGATCAGACC CACAATACGC 000160 000161 CCCAGCCTCT GGAGGACACA GAGAGAATGG AAGTCGTGGA GAAGAAAAGA GAAAAGTCTC AGAGGACCAG GATATACCCT 000240 000241 CAGGACTAGC ACTGTGCCTG CCGTAGAACG GGGCCTGCTC AGTGTTTTTT GGGTTGAGCT GCATCTTAGA ATGAAATCCT 000320 000321 ACAACTGAGA TGGCTAAAGG AATTAAAAAT GGTATCTGTA ATGTTAAATT TCAGACTGCT GCACAATATG TCAGTTTTAG 000400 000401 GTACTTTTTA AAAGATGAAC AAGTACAAGA CTTCAAAGAA GTCTCTCCCT TGTGAAGGGT CCCTTCCGGC TTCACTTTAG 000480 000481 AGTCTCTGCA CTTTTAGTTC ATCTCATTTG GGTGTTTCAA GGGAACAGAG AAGCCCTGGT TTAGATGATG CAGGGTTTTC 000560 000561 TGATGCCAAA GTGAGAATGA TAAAATGTCT GAAGGAAGAA CACGATGCTA TGCATTCCAG GCAGAATCTG GACTTGAAAA 000640 000641 CAATGAAGCA CAAATACTTT TAGATGAACT GATTCACTTT TATTTTGTAA ACATCCTAGA AGAATTCCAT TTGCACTGAA 000720 000721 CTGTTTGAAT CACTGCAGAG CTCTTGCTCC TTCTAATCCC CAAGGAAAGT CGATCCATCG CGTCCTGCTA CACTGTATTT 000800 000801 CTTCACTTTG CCCCTTTTCT CAATTCTTTG TGATCAGCAT AAAGTTTGAA CCGTGCCTCT TCTCGCCTTC CTGCCTGGCC 000880 000881 ACCTGTCCAG CCCTGCGGTC AGCTGTACCG ACCAGCAGAC GGTGCCTCTC TTGCCAAGTG GAGCCGATGC TCTGTGACCA 000960 000961 TTGTTCGTGG GGCCACACTG CCATCCCCAT CGTTGCCCCT TCAGGACACT CGTCAACAGC TGTAAGAGGC TTCCCATCCT 001040 001041 CGCCCATATA AAAGGAAGGC CTGAAAACAC TTCTCGGAGC ATCAGTTCAT AGGTCACCGC AACCGGCCGA ACAATACGCG 001120 001121 ATTATTCAAC GGGCTCCAAT TCATTTTCCT CTGCTCCTCC CCCACCGTTA CCCTTGAGAG AAAACTAATT TGCAGAAAAA 001200 001201 TAGCCCCTGC CAGCCAACTT CTTCTCCTAA ATGTATGCTG ACCCCGAACA AAAAAAAAAA AAAAA |
Predicted Small Protein
Name | NONHSAT101689_smProtein_83:265 |
Length | 61 |
Molecular weight | 6406.1415 |
Aromaticity | 0.0166666666667 |
Instability index | 86.9283333333 |
Isoelectric point | 6.70330810547 |
Runs | 7 |
Runs residual | 0.0330673758865 |
Runs probability | 0.0130718954248 |
Amino acid sequence | MLVLKGMTCHPNIISPSSSRSDPQYAPASGGHRENGSRGEEKRKVSEDQDIPSGLALCLP |
Secondary structure | LEEEELLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHLLLLLLLLLLLLLEEELL |
PRMN | - |
PiMo | - |