NONHSAT101711
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT101711 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
458 nt |
Genomic location |
chr5+:61763031..61779217 |
Exon number |
4 |
Exons |
61763031..61763090,61766077..61766135,61770243..61770291,61778928..61779217 |
Genome context |
|
Sequence |
000001 CTTCTGGCAA TGAAGCTGCA ATTTTGAGTT CACTAGAACG AACACTGCTA TCATTGAAAG TGCTGCGTAA GTTAACTGTT 000080
000081 AATGGATTTG TGGAACCTCA TAAGAATATG GAGGTGATGG GTTTTTTACA TGGAATATTT GAACGTCTAA AACAGTTTCT 000160 000161 GGAATGCACT TTTGGACTTC TTGGATCAGC ATCCTTTTTC ATTTACTCCT CTAATTCAGA GATCACTGGA ATTTTCTGTA 000240 000241 AGCTATGTTT TTACAGAAGT TGGTGAAGGC GTTACATTTG AACGATTCAT TGTCCAATGT ATGAATCTTA TTAAGATGAT 000320 000321 TGTCAAAAAT TATGCTTATA AGCCATCCAA AAATTTTGAA GGTAATTCCT TTATTGGCAG TTTAAAAGAA TTATTTTAAT 000400 000401 CTTAAGTGTG ATATAATTGC TATAATTACA AACTTTTTAA AAAATGTCAT TTTAGTCT |
Predicted Small Protein
Name | NONHSAT101711_smProtein_107:265 |
Length | 53 |
Molecular weight | 6056.0388 |
Aromaticity | 0.211538461538 |
Instability index | 42.4175 |
Isoelectric point | 6.51861572266 |
Runs | 9 |
Runs residual | 0.0227075184702 |
Runs probability | 0.0394806571277 |
Amino acid sequence | MEVMGFLHGIFERLKQFLECTFGLLGSASFFIYSSNSEITGIFCKLCFYRSW |
Secondary structure | LLLHHHHHHHHHHHHHHHHHHHHHHLEEEEEEEELLLLLLLEEHHHEEEEEL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLL |
PiMo | oooooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiii |