NONHSAT101751
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT101751 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
708 nt |
Genomic location |
chr5-:64824807..64825613 |
Exon number |
2 |
Exons |
64824807..64824844,64824944..64825613 |
Genome context |
|
Sequence |
000001 Gggccgggca cggtggctca cgcctgtaat cccagcactt tgggaggccg aggcgggtgg atcacaaggt caggacatcg 000080
000081 agaccatcct ggctaacatg gtgaaaccct atctctacta aaaacacaaa aaattagcct ggcatggtgg cgggcacctg 000160 000161 tagtcccagc tactcagggg ctggggcagg agaatggcgt gaacccggga ggcggagctt gcagtgagct gagatggcac 000240 000241 cactgccctc cagcctgggt gacagagtga gactgtctca aaaaaaaaaa agaaagaaag aaaaGGTACC TACTCTCTTA 000320 000321 TTACTGAAAA CACACCATTA TTTTGCCTTT CAATATGATA TTAAAATTTA CTGCTCAAAA CCTCTTGTAT TTTTTAATTT 000400 000401 AACCATAGAA TATTACCACA AATTTAGCGC CTACTGTATA TTTACCTTTT CAAATGCTTT CTGCTAGGCT TTTTCACTAC 000480 000481 TGATGTCTGA ATGGAAGTAT CCTGGACCAC TGTGTAAATT TGACTATCGT TCAGAAATAA AACTGGGATT AAAGACCAAG 000560 000561 CAATTAATTT GAATTATTTT ATTCTAGTTC CAAAAGCTGA GACAAGATCT TGAAATGGTA CTGTCCACTA AGGAGTCAAA 000640 000641 GAATGAAAAG TTAAAGGAAG ACTTAGAAAG GGAACAACGG TGGTTGGATG AACAGCAACA GATAATGG |
Predicted Small Protein
Name | NONHSAT101751_smProtein_233:466 |
Length | 78 |
Molecular weight | 9174.7789 |
Aromaticity | 0.181818181818 |
Instability index | 45.7376623377 |
Isoelectric point | 9.71563720703 |
Runs | 14 |
Runs residual | 0.0457368718238 |
Runs probability | 0.0635488429606 |
Amino acid sequence | MAPLPSSLGDRVRLSQKKKRKKEKVPTLLLLKTHHYFAFQYDIKIYCSKPLVFFNLTIEY YHKFSAYCIFTFSNAFC |
Secondary structure | LLLLLLLLLLHHHHHHHHHLLLLLLLHHHLHHHHHHHEEEEEEEEEELLLEEEEEELEEE LLLLLEEEEEEEELLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHH HHHHHHHHHHHLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTT TTTTTTTTTTToooooo |