NONHSAT101761

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT101761

Source

NONCODE4.0

Same with

,

Classification

sense

Length

529 nt

Genomic location

chr5+:64959946..64960593

Exon number

2

Exons

64959946..64960211,64960331..64960593

Genome context

Sequence
000001 CTGGTTTTTA TTCTCCTGGA TATGGAGAAA ACAAGTTTAC TGTCACTAGT AGAAATATTG CAGTACCTCT TTGTGAAATG 000080
000081 AACAAGATTT ATTCCTATTA TTCTGATTCC TCCAGCAGTG AAAGGACTAT GGATCTGGTT TTGGAAATGT GCAATACCAA 000160
000161 TTCCATCCAC TGGTGTGGAA TTTCAGGAAG ACAGCTGGGA AAGCTGCATC CAAGTTCTTC GCTCTGTCTT GCCCTTACTC 000240
000241 TGCTTTCTTC AGTACAGGGA CTGCAAAGCA TCTCTGGCTT AAGACTAACA GACACATTCT TAAAGAGAAC ATATGAATAT 000320
000321 GATGACATCG CACAAGTCTG TGTGGTATCT TCTGCCATTA AAGTGGAAAG CTGAAGGAAA CTTCCAATGT TAGGCTTTTC 000400
000401 ATTTAGTTTC ACAGAACTGC TCTTTTTGTT ACCTTTGTAA AATGATGACG TCAACAACGA AGTAAATATG TTACTTAAAT 000480
000481 TTTCTTTCCT GTAAAATGGT TAAAATATTA AATATTTGTT TTGAAGAGA
[back to top]

Predicted Small Protein

Name NONHSAT101761_smProtein_77:373
Length 99
Molecular weight 10846.2534
Aromaticity 0.0714285714286
Instability index 44.2653061224
Isoelectric point 6.02886962891
Runs 17
Runs residual 0.0344268548541
Runs probability 0.0381194343132
Amino acid sequence MNKIYSYYSDSSSSERTMDLVLEMCNTNSIHWCGISGRQLGKLHPSSSLCLALTLLSSVQ
GLQSISGLRLTDTFLKRTYEYDDIAQVCVVSSAIKVES
Secondary structure LLEEEEEEELLLLHHHHHHHHHHHHLLLLEEEEEELLLLLLLLLLLHHHHHHHHHHHHHH
HHHHHLLLEELLHHHHHLEELLLLEEEEEEEEEEEEEL
PRMN -
PiMo -